Talaromyces rugulosus: TRUGW13939_10071
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Entry
TRUGW13939_10071 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
trg
Talaromyces rugulosus
Pathway
trg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRUGW13939_10071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_10071
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRUGW13939_10071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_23
AAA_29
AAA_27
AAA_21
Motif
Other DBs
NCBI-GeneID:
55997552
NCBI-ProteinID:
XP_035349077
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All DBs
Position
V:join(4479213..4479560,4479673..4479826,4479880..4482263,4482314..4482988)
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AA seq
1186 aa
AA seq
DB search
MARGSGAASSPAAATPALKRSTSSTQNMKNQRSILGFFQKSSPATPSTATRNAEPASSPT
QRVAAGKSSTVKSKSAVQNLTPVPSSDAIEPDEEDDVPQKVSSSQLKDILLFRIVSVKKR
VNYIESDSEGEDDDEAIFKPNRSRKRRRPAVESEDEFKAEVDLPEEDEMDDFVVADESDE
DARPSKKRKKTAKSVPPKAQLNEPPSPMGNVDLDIPESTAGGTAQQWAFDPDNKEPRKPR
DPVVSTNNGVKRKEKAHETEPEKRYPWLANITDIDRNPPGDPNFDPRTIYIPPLAWSRFS
PFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDRVNMRMVGVPEMSL
DHWANQFVAKGYKIARVDQSESALGKEMRERDDKKGAKKEDKIIKRELACVLTSGTLVDG
SMLQDDMSTYCVAIKEVILDGLPAFGIAFVDTATGQFHLAEFQDDADMTKFETFVAQTRP
QELLLEKSAVSQKAMRILKNNTGLTTLWNHLKPVKEFWESEITIRELDASDYFVSEDKDN
IEAWPQVLREARDKEYAMSAFGALIQYLRVLKLDRDLVTIGNFNWYDPIRKATSLVLDGQ
TLINMEIFANSFDGGSDGTLFQLLNRCITPFGKRMFKQWVCHPLMDTNKINARLDAVDSL
NADTVVRDQFSSQLTKMPDLERLISRIHAGACKAQDFLRVLEGFEQIEYTMSLLKELGSG
DGVIGKLVSSMPDLVSPLEYWKTAFDRLKAKENGILVPEPGIEEDFDASQEIIDELHREL
DSLLKNVRRDLGSSAICYKDNGKEIYQLEVPIKVKNIPKTWDQMSATKQVKRYYFPELRV
IIRKLQEAQETHGQIVKEVAGRFYARFDENYETWLKSVRIVSQLDCLISLAKASSSLGQP
SCRPVFVDDDRSVLEFEELRHPCMLQNVTDFIPNDVKLGGETPNINLLTGANAAGKSTIL
RMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA
TPRSLVILDELGRGTSSYDGVAVAQAVLHHIATHIGSLGFFATHYHSLAAEFAGHPEIAP
KRMQIHVDEEERLVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVENAETAAKQWEHTSRL
TESLERRKGGGLIGLGWWSDVAWLLRDDAEVSDQGLEILRKAIEAL
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggggaagcggcgccgcgtcctcgcccgctgctgcgacgcccgccttgaaacga
tccacgtccagcacccagaacatgaagaaccaaagatccatactgggctttttccaaaag
tcctctccggctacaccatcgacagccacccggaatgccgagccggcatcgtctcccacc
cagcgcgttgccgctggcaagtcgtcgacggtcaagtccaaaagcgccgtgcagaatctg
acgccggttccgagtagcgacgcgattgagccggatgaggaagatgatgttcctcagaag
gtcagttcctcgcaattgaaggatattttactgtttcgtatagtgtcggtcaaaaagaga
gtcaattatatcgagtctgatagcgagggagaggatgatgatgaggcgatcttcaagccc
aatcggtcgcggaagcgacgcagacctgccgttgagagcgaagacgaatttaaggcagag
gtcgaccttcctgaagaagatgaaatggacgactttgtcgtcgccgacgagtccgatgaa
gatgcgcggccatccaagaagcgaaagaagacggccaaatctgtgccgcccaaggcacaa
ttgaatgagccgccctcgcctatgggtaacgtcgatctagatattccagaatcgaccgcg
ggtggcacagcgcagcaatgggcattcgatcccgataacaaggaacctcgtaaaccgcga
gatccagtagtctccacgaacaacggtgttaagcgaaaggagaaagcacacgagaccgag
cctgaaaagcgatacccatggcttgctaatatcaccgatatcgatagaaatcctccaggt
gatccgaatttcgatccacgtacaatttatataccgccgctggcttggtctcgtttttct
cctttcgaaaagcagtactgggaaatcaaacaaaagttttgggataccgttgtgtttttc
aaaaagggcaagttctatgaactttatgagaacgatgcaactattggccaccagctattt
gacttgaagctcaccgacagagtcaacatgcgcatggttggtgtacctgaaatgagtctc
gatcactgggccaaccaatttgttgccaaaggctacaagatcgcccgagttgatcagtcc
gagtctgctctaggaaaagagatgcgtgaaagggacgataagaaaggcgcaaagaaggag
gacaaaatcatcaagcgtgaactagcatgtgtccttacttcgggcactttggtggatggt
tcaatgctccaggatgatatgtcaacgtattgtgttgcaatcaaagaagtcatcctggat
ggacttcccgccttcggcattgcctttgttgatactgctactggtcaatttcacttggct
gaatttcaagatgatgccgacatgacaaaattcgaaacgtttgtcgctcagactcgacca
caagagttgctgctggaaaagtccgcagtcagccagaaagcaatgcgtatcctcaagaac
aacacaggacttacaactctttggaatcatttgaaaccagtcaaggagttttgggaatct
gaaattactataagagagctcgatgccagtgattattttgtttccgaggacaaggacaac
attgaagcctggccgcaagtccttcgtgaagcgcgcgacaaagagtatgccatgtctgca
tttggtgcactgatacaatatctgagagtgctcaaactggaccgtgacctggtcaccatt
ggcaacttcaactggtacgatccgattcgcaaggctacgagcctcgtcttggacgggcaa
actctcatcaacatggaaatatttgccaattcatttgatggtggcagcgatggaacacta
ttccagcttcttaaccgctgcattactccttttggcaagcggatgtttaagcaatgggta
tgccatccattgatggataccaataaaatcaatgcaagactcgatgccgtcgactcacta
aatgccgatactgttgttcgtgaccagttctcgtctcagttgactaaaatgcctgatttg
gaacgattgatttctcgcattcacgccggagcgtgcaaagcacaggatttcctgcgggtt
cttgaaggatttgagcaaattgaatacacaatgagtctactgaaagagcttggttcaggt
gatggtgtgataggcaaacttgtctcgtccatgccggatttggtgtctccattggagtat
tggaagactgcctttgacagactcaaagccaaagagaacggcatccttgttccagagccc
ggcatcgaggaagactttgacgcatcacaagagattattgacgaattacatcgtgaactg
gacagtcttttaaaaaacgttcgtcgtgacctcggttcaagcgcgatttgttacaaggac
aatggcaaggagatctaccagcttgaggtaccaattaaagtcaagaacatccccaaaact
tgggaccaaatgtccgctaccaaacaggtcaagcgctactacttccctgaattgcgagtt
atcatccgcaaactgcaggaggcacaagagacacatggccagattgtcaaggaggttgca
ggcagattctacgcccgatttgacgagaactatgagacttggttgaagtctgtcagaatt
gtttcacaattagactgtctgatcagcttggctaaagcctcttcgtccctcggacagcca
agctgcagaccagtctttgtcgacgatgatcgaagcgtactcgaatttgaggagcttcgc
catccctgcatgctgcagaacgtgacagattttatccccaatgatgtgaagcttggaggc
gagaccccgaacatcaatttgttgactggtgccaatgctgctggtaaatcaactatactg
agaatgacctgtgttgcagtcattatggcccagattggctgctacttaccctgccagtct
gctcgcctgacccctgtagaccgaatcatgtctcgtctaggtgcaaatgacaatatcttt
gccgcgcaatccaccttctttgttgagttgtccgaaaccaagaagatcttgtcggaggcg
acacctcgttccttggtgattcttgacgaactcggtcgaggcaccagctcgtacgacgga
gtagctgtggcacaagcagtgttgcatcacattgcaacccatatcggctccctgggattc
tttgcaacacactaccactcgctcgcggccgagtttgctggacacccggagattgcacct
aaacgaatgcagatccacgtcgatgaggaggaacgactagtcactttcctctacaaactg
gaagaaggagtggccgaaggaagtttcggtatgcactgcgcatcgatgtgcggtattccc
aacaaggttgtcgagaatgccgaaaccgcggccaagcaatgggagcacacgagccgcctg
actgaaagcctggagcggcgcaagggcggcggcctcattggccttggttggtggagtgac
gttgcctggcttctgcgggacgacgccgaggtttctgaccagggattggagattctgcgc
aaggcgatcgaagctttatag
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integrated database retrieval system
