Talaromyces rugulosus: TRUGW13939_11488
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Entry
TRUGW13939_11488 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRUGW13939_11488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_11488
Enzymes [BR:
trg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRUGW13939_11488
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TRUGW13939_11488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
55998966
NCBI-ProteinID:
XP_035350488
LinkDB
All DBs
Position
VI:complement(join(3209450..3209803,3209872..3210598,3210646..3213816,3213880..3213965))
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AA seq
1445 aa
AA seq
DB search
MQSMIEVLGKAQVIDNVPKVIKQLKFGALSNDDILSQAVVEVSDRRFYDLERNRVVQENG
PLDRRLGISSKTDKCLTCDLGHKECNGHFGHVRLVLPAFHVGYFRRVITILQIICKECSA
ILVPETERRAFLREMRRPRMDNLRRLQVAKRVIERGKKSRSCYICGAVNGTVKKVGSNAL
KLVHDKFRYFNQSTAANKVMPPSKEMFDRSLLEARATNPDVDRYYKKAQDDLNPLRVLNL
FKKISNADCELLGLDPNEVRPETFLWQFVPAPPNCIRPSVSQDGASNEDDLTAKLGDIVQ
SNITLRNNLRKGAPIHIIVECWEYMQLQIAIYINGDTPGLKTEVGKPTRSLVSRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPELVARNMTYPEVVTRYNIERLQQHVRN
GRKKWPGANMLIKANESFRSILKYGDFNKFAENLQVGDIVQRHLVDGDIALYNRQPSLHK
LSILSHFVKVRPHRTFRMNECVCNPYNADFDGDEMNLHIPQTEEARTEAMELMGVKNNLV
TPKNGEPIIGAIQDFISAAYLLSGKDNMFDRRTFTQTCLYMLGPETRFDLPPPSVVKPQM
LWTGKQVFNILMRPNKSDPVKVNIDAACREFRQPKDNTPKDMDPNDGWLIIRNSEIMCGV
MDKSTIGSGKKDNVFYIMLRDFGPLAAAEGMNRLSRLCARWFTNVGFSIGIGDVYPSKRL
VQSKNDLVEKAYAACDEVIAKYKAGKLEKMPGCDEVQTMENQVSGFLSKVRQQAGDECIQ
QLSKYNAPLIMATSGSKGSSINVSQMVAVVGQQIISSERVQDGFQDRTLPHFPKNARSPP
SKGFVRNSFFSSLTPTEFFFHAMSGREGLIDTAVKTAETGYMSRRLMKSLEDLSAKYDGT
IRTSSASIVQFSYGGDDLDPVNMEGKAKPVHFDRTYNHAMAITHDNKDRGLFPSEIMEVT
DELLDKEKARFVRKDLFGNELGYLERTDVGVDQYESARDFIQSIRDFVQSKADRLISSGG
DRRRTPHEKFNMSRDHVDKLSEKSLRYFIQACLSKYEKAKVEPGHAVGAVGAQSIGEPGT
QMTLKTFHFAGVGNLALTQGVPRIKEIINASKEISTPLISCQLITKEAVEVARIVKGRIE
KTFLRDIIHYVKETWTGRAAYITVKVNHETLSKLQLELKMEGIVAAIKNHKRFRAPDLSF
NHSRHHIQIHLDMDPVKKKDLSKTDIALTSSDPFLRLKHLKRMLPDIQVLGHPQARRAVI
HTDDTTNKLLVEGYGLRECMTTEGVEGLHTTTNNVIEAKAILGIEAARATIINEMSEVMK
DMDIDPRHMHLLADIMTTTGEVLGITRFGMSKMRDSVLQLASFEKTADHLFDAGGTGRTD
PVEGVSECIIMGKTVSLGTGAMEVIRKLNFYAGHLGPKKTVFEDAWTEMCAPPEAPKRRA
RRPRA
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtatgatagaagtcctgggcaaggcccaggtcatagataatgtacccaaggtc
atcaaacagctgaaatttggtgcgctatcaaacgatgatatcctcagtcaagctgtggtc
gaagtctcggatcgacgattttacgaccttgaacggaaccgtgtagtccaggagaatgga
cctttggaccggaggcttggaatcagttccaagacggacaaatgtcttacgtgcgacctt
ggacacaaagaatgcaacggtcactttggacatgtgcgactggtgctgccagctttccac
gtgggatacttcagacgtgtcattactattttgcaaattatctgcaaggagtgctcggca
atcttggtccccgagacagagcggcgcgctttcttgagggaaatgcgtaggcctcggatg
gacaatctgagacgcctacaggtcgcaaagagggttattgagcggggcaagaaatcgagg
agctgttacatttgcggtgctgtcaatggtacggtgaagaaggtcggctccaacgcgctg
aaactcgtccacgacaagtttcgttatttcaaccagtcgacagcagccaacaaggttatg
ccacccagcaaggagatgtttgacagatcattgttagaagctagggccacaaatccagac
gttgatcgatactacaagaaagcccaggatgacctgaacccgttgcgagtcttgaatctg
ttcaagaaaatctcaaacgcggactgtgagctcctaggcctagatccgaatgaagttcga
ccagaaacgttcctctggcagttcgtccctgcaccgccaaattgcattcgtccgtcagtg
agccaagatggtgcatccaacgaagatgatctcactgccaagctgggcgacatcgtccag
agcaacattactctccggaataacttgaggaaaggcgcgccaattcatatcatcgttgag
tgctgggaatacatgcagttgcagattgccatctacatcaatggtgatacccctggactc
aagactgaggtcggaaagccgacacgctcgctagtttctcgcttgaaaggaaaacaggga
agattccgaggtaacttgtctggaaagcgtgtcgatttctctggacgaacggtcatctct
ccagatcccaacttgcggattgacgaagtggcagtcccggaactggtggcgaggaacatg
acatatccagaggtggtgactcgctataacatagaaaggcttcagcagcatgtccgcaat
ggcagaaagaaatggccaggtgcaaatatgctcataaaggcgaacgagtcattcagaagt
attcttaagtacggcgatttcaacaaattcgcggaaaatctacaggtaggagacattgtg
cagcgccatcttgttgatggtgatattgcactttataaccgacagccttcgcttcacaaa
ctcagtattctttcccactttgtgaaagtccgtccacacagaactttccggatgaatgaa
tgtgtttgcaacccgtacaatgccgatttcgacggagacgagatgaacttgcacattcct
caaacagaggaagctcggacagaggccatggaattgatgggagtaaagaacaacttggta
acgccaaagaacggagagcctatcatcggtgctattcaagattttatcagtgcggcatac
ctcttgagtggcaaggacaacatgtttgataggcggacttttactcagacctgtctatac
atgcttgggccagaaacgcgatttgatctcccacctccgtcggttgttaagccacagatg
ttgtggactggaaaacaggtcttcaacattcttatgcggcctaacaaaagcgacccagtg
aaagttaatatcgacgctgcttgccgagaattcagacaaccaaaggacaacaccccaaaa
gacatggatcccaacgatggatggctcatcattcgtaactcggagatcatgtgcggtgtg
atggacaagagcacgattggttccggaaagaaggacaacgtcttttacatcatgctgaga
gattttggtcctctcgccgcagcagaaggcatgaaccgactctctcgactatgtgccagg
tggtttacgaacgtggggttttcaattggtattggagatgtgtacccgagtaaaagacta
gttcagtcgaagaatgatctggttgagaaagcttatgccgcttgtgatgaagtcatcgcc
aagtacaaagcgggcaagttggaaaagatgccgggttgtgacgaagtgcagaccatggaa
aaccaagtgtctggatttctttccaaagttcgtcaacaagccggtgacgagtgtatccag
cagctaagcaagtacaacgcacctctcatcatggctacttctggatccaagggttccagt
atcaacgtttctcagatggttgcagttgtgggtcagcagattattagcagtgaacgtgtc
caggacggatttcaggaccgtacattgcctcacttcccaaagaatgctcgttcaccgcca
tcgaaaggttttgtgcgcaacagcttcttctctagcctaacacctaccgagttctttttc
cacgcaatgtctggacgtgaaggtttgatcgatactgcagtcaaaactgcagagaccgga
tacatgtctcgccggttgatgaagtcacttgaagatttgtctgccaagtacgacggaact
attcgaacatcgtctgccagcatcgttcaattcagctacggaggagacgacttggatcct
gtgaacatggagggcaaggccaagccagttcattttgaccggacttataatcatgccatg
gcaattacacatgataataaagaccgtggcttgttcccatcagagatcatggaggtaacc
gacgaattgctggacaaagaaaaagcgagatttgttcgcaaagatctttttggcaacgaa
cttggatacttggagcggactgatgttggtgtcgatcaatacgagagcgcccgtgatttc
attcaatctattcgcgattttgtccagtcgaaagcagatagacttatttcgtcgggaggc
gacaggagaaggacaccgcacgaaaagttcaacatgtcccgggaccacgttgataaatta
tcggaaaagtctcttcgctatttcatccaggcctgtctatcgaaatatgaaaaggccaag
gttgagcctggtcacgcagtgggtgcggtgggtgcacagtcgattggagagcccggaaca
cagatgacactgaaaactttccattttgctggtgtcggtaacttggcactcacccagggt
gttccgcgtatcaaggaaattatcaatgcttccaaagaaatcagtactccgcttattagt
tgtcaactcatcaccaaagaagccgtcgaggtggctcggatcgtcaagggcagaattgag
aagactttcctacgcgacatcattcattatgtgaaggagacgtggacgggcagggctgcc
tacattacagtcaaagtcaatcacgagaccttgtctaaacttcagttggaacttaagatg
gaaggcattgtcgcagctatcaaaaaccataaacggttcagagccccagatctttccttt
aatcattctcggcatcacatccagatccacttggacatggatcctgtcaagaagaaggac
ttgtcaaagacagacattgctttgacaagttcagaccctttccttcggctgaagcatctc
aagcggatgctgccagatattcaggttctcggccatccgcaggcgcgacgagccgttatt
catacggacgataccacgaataaactgctcgtcgagggttacggactgagggagtgtatg
acaacggaaggagtggagggcttgcacacaacgaccaacaatgtcatagaggccaaggcg
attttgggtattgaggcagcacgtgcaaccatcattaacgagatgagcgaagtcatgaaa
gacatggacattgatcctagacatatgcatctcttggcagatatcatgaccacgactggt
gaagtactcggaatcacgcgctttggaatgtccaagatgcgcgactctgtccttcagctt
gcttcctttgagaagacggccgaccatctgtttgacgctggaggcactggccgcacagac
ccggtcgagggagtgtctgaatgtatcattatgggcaagactgtgtctctcggcacaggc
gccatggaggttatccggaagctcaacttttacgcagggcatctggggccaaagaagacg
gttttcgaagacgcctggactgagatgtgcgctccaccggaggcacccaagagaagagcg
agaaggcccagggcgtga
DBGET
integrated database retrieval system
