Treponema ruminis: DYE50_07995
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Entry
DYE50_07995 CDS
T07166
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
tri
Treponema ruminis
Pathway
tri00730
Thiamine metabolism
tri01100
Metabolic pathways
tri01240
Biosynthesis of cofactors
tri04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DYE50_07995
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DYE50_07995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tri03016
]
DYE50_07995
Enzymes [BR:
tri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
DYE50_07995
Transfer RNA biogenesis [BR:
tri03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
DYE50_07995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
tRNA_Me_trans
DUF4928
Motif
Other DBs
NCBI-ProteinID:
QSI02508
LinkDB
All DBs
Position
complement(1813663..1814829)
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AA seq
388 aa
AA seq
DB search
MEYSKFYIGKIGELILKGSNIKIFEKQLVRNTKAYLKDVNARVTLQAGRLYVECDEEAQE
RVEFALSHLIGITGWAEAVIVEKNIEAIKQEVLNEAIKARDAGAKTFKLESRRSDKSFPY
DHYGICSEGSSLAYNQKILDVDVKNPDVVIMVEVRDRCFVYSNRTKGRRGLPVGVSGKGL
LLLSGGLDSPVAGYRMLRRGMTIDCVYFHAYPYTSDEAREKVEHLAEILSGYGLRIHINT
IPFTEVQMQIKKKSPENYTTLMLRLCMMKAANMLAERIGASCLITGESLGQVASQTIENM
SCTESMAEYPLLRPLVGTDKEEIVEIAKEIGTYETSILPYEDCCVLFSPRHPVLRSSVEE
AQRIYKELEIDDLVREAFEKREIKLYEV
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaatatagcaaattttatatcggaaaaatcggcgagcttattttaaagggctctaac
atcaagatatttgagaagcagcttgtccgcaataccaaggcttaccttaaagatgtcaat
gcccgggttaccttgcaggcaggccgcctttatgttgaatgtgacgaagaggctcaggag
agggtagaatttgcactttctcacctgattggaatcaccggctgggctgaggccgtcatt
gtcgaaaaaaatatcgaggctatcaagcaggaagttttgaatgaggccattaaagcccgc
gatgccggagcaaagacatttaagcttgagtcccgccgaagcgacaagtctttcccttat
gaccattacggaatctgctcggaaggctcaagccttgcctacaatcagaaaatacttgat
gtcgatgtcaaaaatcctgatgtcgtaatcatggtcgaggttcgtgaccgctgcttcgtt
tactcaaacagaactaaaggccgccgcggattgcctgttggcgtgagtggaaagggactt
cttcttctttctggaggccttgattccccggttgcaggctacagaatgctgcgccgcggc
atgacaattgactgcgtttatttccacgcctatccatacacaagtgatgaagcccgcgaa
aaggtcgagcaccttgcagaaatcttgagcggctacggacttagaattcacatcaacacg
attccctttaccgaagttcagatgcagattaaaaagaagtctcctgaaaattacacgacc
ctcatgctccgcctctgcatgatgaaagccgcaaacatgctggcagagcggatcggggca
agctgcctgattacgggcgaaagtctcgggcaggttgcaagccagacaatcgaaaacatg
agctgcacagaaagcatggccgagtatcctcttttaaggcctctggtcggcacggataag
gaagaaatcgtcgaaatcgccaaggaaatcggaacttacgaaacatcaattctgccatac
gaggactgctgcgttcttttcagcccccgccatcctgtccttcgctcaagtgttgaggaa
gcccagagaatttacaaggaacttgagattgacgatctggtccgagaagcatttgaaaag
cgcgaaatcaaactttacgaggtctaa
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