Treponema ruminis: DYE50_10425
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Entry
DYE50_10425 CDS
T07166
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tri
Treponema ruminis
Brite
KEGG Orthology (KO) [BR:
tri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tri03009
]
DYE50_10425 (rimO)
Enzymes [BR:
tri01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DYE50_10425 (rimO)
Ribosome biogenesis [BR:
tri03009
]
Prokaryotic type
ribosomal protein modification factors
DYE50_10425 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
DUF3077
Motif
Other DBs
NCBI-ProteinID:
QSI02979
LinkDB
All DBs
Position
complement(2401109..2402611)
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AA seq
500 aa
AA seq
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MNRMKFFIDQHGCAKNQVDGELIISLLKKQDWEQTFEPAEADLIVVNSCGFIESAKTESI
NAVMSARQMYPKAKILLAGCLAERYAKDLKDDLLEADGFFGNGDLSQIYKVIEPLMKDER
PVLVPEQKGVCCGDRNLLLSFKGTAFVKITEGCNNRCSFCAIPIIRGNLRSRKATEIIEE
IKDLVSKGVYEINLIGQDLAAYGTGAEDDCFGDGRTFLPNGTPGSEVGESPSTLGESGLA
RLIRMISQIEGTFAVRLLYIHPDHFNEDILPLMKVDSRFLHYFDIPFQNGDDAIIKAMNR
VGSAQKYKALIAKIRETFPDAAIRTTFMAGFPGETEESFENTKAFLRETATDWSGCFSYS
KEDDTPAYSFKKQVPHKTAERRATELVEIQAQITRERLKARVGIETDILIEEVLSQSEEN
PDEGLAIGRAWFQAPEVDGSVVVRYDRSSDSEKNAVQSGRLVRVKIISSGDVDLNGDFVC
DSPLNEKISKSDAISFAQEI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgaatagaatgaaattttttattgaccagcacggttgtgcaaaaaatcaggttgacggt
gagcttatcatcagccttctcaaaaaacaggactgggagcagactttcgagcctgccgag
gctgatttaatcgtcgtaaactcatgcggatttattgaatctgccaaaactgaaagcatc
aacgctgtaatgagtgcccgacagatgtaccccaaagccaaaatcctgctggctggctgt
cttgccgagcgctatgccaaggacctcaaggatgatttactggaagccgacggatttttc
ggaaacggcgacctgagccagatttacaaggtaatcgaacccttgatgaaggacgagagg
cctgttcttgtgcctgagcagaagggcgtttgctgcggcgaccgcaatcttcttctttcg
tttaagggcacggcttttgtaaaaattaccgagggctgcaataaccgctgttctttctgc
gcgattcctatcatccgcggaaatttacgcagccgcaaagccacagaaatcatagaggaa
atcaaagacctggtatcaaagggcgtatatgaaatcaaccttattggtcaggatctggcg
gcctatggcactggagccgaagacgactgttttggtgacggaagaacattcctgccaaac
ggtacgccgggaagcgaagtaggtgaaagccccagtaccctcggcgaatcagggcttgct
cgccttatccgcatgatttctcagattgagggaacttttgcagtccgccttttgtacatt
catccggatcactttaacgaagacattctcccgctaatgaaggttgattcacgcttcctt
cattattttgacattcctttccagaacggtgacgatgcaatcattaaagccatgaaccgg
gttggttctgctcaaaaatacaaggccctgattgcaaaaatccgcgagactttcccggat
gccgcaatccgcacaaccttcatggcaggcttccctggcgaaacggaagaatctttcgaa
aatacaaaggcctttttgcgtgagacagcaacagactggagcggctgtttttcttattca
aaggaagacgatacgccggcctattctttcaaaaagcaggttcctcacaaaaccgcagag
aggagggcaactgagcttgttgagattcaggcccagattacccgcgagcgcctcaaggcc
agagtcggtattgaaacagacattttgattgaggaagttctttctcaaagcgaggaaaat
ccagatgaaggactggctatcggccgcgcatggttccaggctccagaagttgacggaagc
gtagtagtccgctacgaccgaagctctgatagcgaaaaaaatgccgtgcagtcaggcagg
cttgtccgggtaaaaatcatttcaagcggtgacgttgacttgaacggtgacttcgtctgc
gattctccgctgaatgaaaaaatctcaaagtcagacgcaatttctttcgctcaggaaatt
taa
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