Trichomycterus rosablanca: 134300352
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Entry
134300352 CDS
T09921
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
trn01001
]
134300352 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
trn04054
]
134300352 (ciita)
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134300352 (ciita)
Protein kinases [BR:
trn01001
]
Serine/threonine kinases: Other
TAF1 family
134300352 (ciita)
Pattern recognition receptors [BR:
trn04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
134300352 (ciita)
BRITE hierarchy
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
AAA_16
Motif
Other DBs
NCBI-GeneID:
134300352
NCBI-ProteinID:
XP_062841141
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All DBs
Position
22:19631970..19652744
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AA seq
1158 aa
AA seq
DB search
MVPFQEVLAEVRRFLQEANPDLLLSLFNQLLEARIFSEQYYQSLFDHVEGNPEDESLGDL
DDLARRLALPVWQNWDTSKGILFSAFMEKEPDFSDFYTEPEDFSVDGDLWGTIDNNLLDC
LGFSSGFDPETYLDSSFCDDVFDTLPDGSEEKSIFAFEEENPAVRKSQTRKRRGKCCETA
SKRGPRPKRNRKAPSSKPPSDVIMATLDGIFQISVPASEPPVVQTLTISTASLMPSGAPT
MQIIQTINHLSPPVINSILPVGPTYVLVSPQSLTPVPQIAPPSPANAAVAPLELSTSTYP
VSSSSESASQRHSPSPPTTVTVVSPSKDKTTSKEFSPTSRQTKTTPVIPKHVEDYIQGLK
SHLRETCSRMDGGRSMETHYVDTQLVRRMLIIRTGKNANKCLEKELVVLSNSERKKSTVQ
RNHVFQNSGSNSKHLITVLGKAGMGKSVFIQRLTLDWSSDDLPQFQFVFLLNCKVLNLTQ
PNYSLKTLLFESSACPPCRNENSSAVFQHVRASPEKVLIVFDSFDDMKDLEGLLQSPATS
EMSQNYSVRQLFSGLFQKKILSGCTLLIASRPKDVLNQLLRKVDSILEVSGFSSKDIELY
TAKYFADSSQQDKAPRKIKSQKYIFSLCSNPLLCQVTCSLVEHHDSNLNALPSSLTDLFQ
QVLSQNLELNNDIEKSKPDLTQLCNVAWEGIKTHSTLFKHNQTISKDLLDYGLDSGILMT
HAGQNSDKIKDTHYANLFMQNFLGALCLVNSNELNDKTLLSQTVLHQRKRKSQGEWQDVL
QRFVIGLLFQKNAVPCCRILHTATDLQAKRKAVEVQLENLKPGTLSSSRLLEVFHCVYEA
RNVKLAKLLVKNLTDDLSFSGAQLSPVDAYVVWHILKCTKGLKRALSIDLRDTCVPLTGL
KDLVALDCVKSFRAPTMDTINLWEDLQSSDDKLTLKRAIEKFTIDPIKVSQVCHVEDLGV
LVQIHKEKKLPSCEADPALEGGIPAVRNLHKLEYELGQQNGPEAFLKLVGILPALESLQY
LDIEKNKIGDAGATKLAGVLKSLSSLKMLNLSQNCIGDAGVENLAEAMAFTSSLQNLSLY
GNLIADRGAESLASVLPLMKSLLDLDVKYNKFTDAGAEKLTAALKSSPWMKSLDMWNDCI
PYGVFEHLQLQDSRIKAL
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggttcctttccaagaggttctcgctgaagtgaggaggtttttacaagaggcgaaccca
gacctgcttctgtcacttttcaaccagcttttggaggctcggatcttttcagagcagtac
taccagtccctgttcgaccatgtcgaagggaatcctgaagatgaaagcctgggtgatctg
gatgacttggccaggaggcttgctctgccagtttggcagaactgggataccagcaagggg
atcctgttctcagcgtttatggagaaggagccagacttcagtgatttttatacagaacca
gaggacttctcagttgatggagatctttgggggactatagacaataacctgttggattgc
ttaggctttagctcaggctttgatcccgagacatatctcgattccagtttctgtgatgat
gtgttcgataccctacctgatggatcagaagaaaaatccatatttgcgtttgaagaagaa
aacccagctgtacgtaaaagtcaaaccagaaagagacgaggtaagtgctgtgaaactgca
tctaaaagagggccgcgtcctaaacgaaatcgaaaagccccgtctagcaaacccccctct
gacgtcatcatggctacgctggacgggattttccagatcagcgtgcctgctagtgaaccg
cctgtggtccagactctcaccatatccaccgcctcactgatgccatctggtgcaccgacg
atgcagatcatacagaccattaatcatctctctcctcctgtgattaacagtatcctgcct
gtaggacccacgtatgtgctggtttcacctcagtccctgacaccagtgccgcagattgca
cctccgtcaccagctaatgctgctgtggctcctctagagctcagcacgtccacgtacccc
gtgagttcctcatcagaaagtgcaagccaacgacattctccatcccctcctacgactgtc
actgttgtttcgccctcaaaggacaaaacaacatcgaaggaattttctcccacaagccgt
caaaccaagacgaccccggtgatcccaaaacacgtggaggactacattcagggtctgaag
tcacacctgagagaaacgtgcagccggatggacggcggcaggagcatggaaactcactac
gtggacacacagctggtcaggagaatgctcattatcaggacgggcaagaacgccaacaag
tgtctggagaaggagttagtggtgctgagcaactccgagagaaagaaatcgacagtccag
cggaatcatgttttccaaaactctgggagcaatagcaaacatttaatcaccgtccttggg
aaggccgggatgggaaagagcgtatttatccagcgtctgaccttggactggtcatccgac
gaccttccgcaattccagtttgtctttttactaaattgcaaagtcctgaatcttactcag
ccgaactacagtctgaagactttgctgtttgagtcctctgcatgccccccctgtaggaat
gagaattcgtcggcggttttccaacacgtccgcgcctctccggagaaggtactgatcgtc
ttcgacagcttcgacgacatgaaagacctcgaaggtctccttcagtccccggctacctcg
gaaatgagccagaactacagcgtcaggcagctgttttctggtctgtttcagaagaagatc
ctatcggggtgcaccctcctgatcgcctccagacccaaagacgtcctgaaccagctcctg
cgcaaagtggacagcatcttggaagtgtccgggttctcctcaaaagacatagaactgtac
acagccaaatattttgcagattcttcccagcaggacaaggcgccgagaaaaatcaagagc
caaaagtacattttcagcttgtgttcgaatcccttactttgccaggttacgtgctctctg
gtggagcatcacgacagcaacttaaacgctttgccatcgtcgcttacggatttattccag
caagtgctcagccagaatctggagctgaacaatgacattgagaaatctaaaccggacctg
acgcagctctgtaatgtagcatgggaaggaattaagactcacagcacgctttttaaacac
aatcaaaccatctccaaggacttgctggactatggacttgactctggaattttaatgacc
catgcagggcaaaattcagacaaaatcaaggacactcactatgccaatctcttcatgcag
aactttctaggtgccctgtgtttggtaaattctaatgaactaaacgataaaacgctttta
tcccaaacggtgctccaccaacggaagcgaaagtctcagggagaatggcaggacgtgctg
cagcgcttcgttattggattactgtttcagaaaaacgccgtcccctgctgtcggattttg
cacaccgctaccgatttacaggcgaagagaaaagccgtagaggtccagctggagaacctg
aaaccaggtactctgagctccagcaggttattagaagtctttcactgtgtgtacgaggcc
agaaatgtcaagctggccaaacttctggtcaagaaccttactgacgatttgtccttttct
ggagctcaactctctccggtggacgcttacgtcgtttggcacatccttaagtgcaccaaa
ggactcaaacgagctctcagcatcgacctgcgggacacgtgtgttcctctcactggtctt
aaagacctggtcgcactggactgtgtcaagtcatttcgggcacccacgatggacacgatt
aacctgtgggaggatttgcaaagcagcgacgacaaattaactttaaaacgtgccatcgaa
aaattcaccatagacccaatcaaggtgtcgcaagtgtgtcacgtggaagacctgggtgta
ctcgtccaaatccacaaggagaagaagctgccgtcatgtgaggctgatcctgctctggag
ggtggcatcccagcggtgagaaatcttcacaagctggaatacgagctcggccagcagaac
ggacccgaggctttcctcaagctggtcgggatcttacccgccctggagtctctgcagtac
ctggatattgagaaaaacaaaattggtgatgctggagctacaaagctagctggcgtgctg
aaatctttatcctctttaaagatgctgaatctttctcagaactgcattggagacgccggc
gtggagaacctggctgaggcgatggccttcacctcgtcactacagaacctcagcctgtat
ggaaatctgatagctgatagaggagctgaaagcttggcctcagttctaccgctcatgaag
tctctgctggatttggatgtaaagtataacaagtttacagacgctggggcagaaaagctc
accgctgcactaaaaagctctccgtggatgaagtctcttgacatgtggaacgactgtatt
ccatacggggtttttgagcatcttcagcttcaagattccaggatcaaagctttataa
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