Trichomycterus rosablanca: 134303902
Help
Entry
134303902 CDS
T09921
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
134303902 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134303902 (mmp2)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
134303902 (mmp2)
Peptidases and inhibitors [BR:
trn01002
]
Metallo peptidases
Family M10
134303902 (mmp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
AGA-YXIM_GBD
Motif
Other DBs
NCBI-GeneID:
134303902
NCBI-ProteinID:
XP_062845437
LinkDB
All DBs
Position
27:3129154..3142930
Genome browser
AA seq
656 aa
AA seq
DB search
MKRFRLSSWRHLVLQVLLFQCFALFGTFAAPSPIIKFPGDDVPRTDKEVALHYLNKFYGC
PQDRCNLMVLKDTLKKMQKFFAIPETGEIDQKTVETMKKPRCGVPDVANYNFFHSKPKWQ
KKDVTYRILGHTPDMDEETIDDAFFRAFKVWSDVTPLTFTRIMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGAGIGGDSHFDDDEQWTLGDGQVVKVKFGNAEGEFCKFPFLFM
GKEYSSCTSQGRDDGFLWCSTTYDFDTDGKYGFCPHELLFTLGGNGQGAPCKFPFTFQGD
KYDSCTTAGRDDGYRWCSTTEDYDQDKSYGFCPETAMSTVGGNSEGAPCAFPFIFLSKTY
DSCTTSGRSDGKMWCSVTKSFDEDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTYTKHFRLSNDDIKGIQELYGVPTDKPLPPTQGPVTPMDICSENIIFDAIAQLRG
ETFFFKDRFLFRTTNPNKKPTGPMLVATFWSELPEKIDAAYENPLEEKSVFFAGDEMWVY
SASTLERGYPKKISSIGLPTDLDRIDAAYSFHKSKKTYLFSGDKFWRYNEAKEKMDPGFP
KLISESWNGVPDDLDAAFSMNGKGHSYFFKDSLYLKMDESLKIIKVGEVKADWLHC
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggttcaggctttccagctggaggcatttagttcttcaagttcttttgtttcag
tgttttgctctgtttggaacttttgcggctccttcacccattatcaagttcccaggcgat
gacgtacctcgaacagacaaagaagtggcactgcactacttaaacaagttttatggatgc
ccacaagaccgatgcaacttaatggttctaaaggatacgttgaagaagatgcagaagttt
tttgctattccggagactggagagattgatcagaagactgttgagactatgaagaagccc
agatgtggcgtcccagatgtagccaattacaacttttttcactcaaagcctaagtggcaa
aagaaagacgttacatacaggatactgggtcacactccagatatggatgaagagactatt
gatgatgccttcttccgtgcctttaaagtctggagtgatgtcacacctcttaccttcaca
cgcatcatggatggagaggctgacatcatgatcaattttggccgcaacgagcatggtgat
ggttatccatttgatggaaaggatggtttgctagcccatgcctttgctcctggtgctggg
attggaggagattcccactttgatgacgatgagcagtggaccctgggagacgggcaagtt
gtaaaggtcaagtttggtaatgcagagggagagttctgtaagtttccgttcctctttatg
gggaaagagtacagcagctgtacatcgcagggacgtgatgatggcttcctttggtgttcg
acaacctatgactttgacacggatggaaagtatgggttctgtccacacgagttgctgttc
acactaggtggaaatggacagggagcaccatgtaagttcccgtttactttccaaggggac
aagtatgacagctgcaccacagcaggtagagacgatgggtaccgctggtgctccaccact
gaggactacgaccaggacaagagctacggattctgtcctgagactgccatgtctacggtt
ggaggaaactctgagggtgctccttgtgccttccccttcattttcttgagtaaaacctac
gattcttgcaccacctctggacgtagtgacgggaagatgtggtgtagcgtaactaaaagt
tttgatgaggaccgcaagtggggcttttgcccagatcaagggtacagtctttttctggtg
gcagctcatgaatttggccatgctctgggtctggagcactctcaagaccctggagcacta
atggcccccgtctacacatacactaaacactttaggctctccaacgatgatatcaaaggc
attcaggagctatatggtgtaccaactgataagccacttcctcctactcagggtccagtt
actcctatggatatctgcagtgagaatataatatttgatgctatcgcgcagctcagaggg
gagacctttttctttaaggacaggttcctattcaggacaactaatccaaacaagaagcca
acaggcccgatgttggtggccactttctggagtgagctacctgagaagatagatgcagcc
tatgaaaacccactggaggaaaaatcagttttctttgcaggtgatgaaatgtgggtgtat
tcggcaagtactctggaaagaggctatcctaagaagatctcctccattggccttccaact
gatcttgaccgcattgatgcagcctattcatttcacaagagcaaaaagacctacctgttc
tctggagacaagttctggaggtacaatgaagccaaggagaagatggaccctggtttcccc
aaactcatttctgaatcctggaatggtgttcctgatgatttggatgctgcctttagtatg
aatgggaagggccatagctacttcttcaaagattccctgtatctcaaaatggatgagagc
ctgaaaatcatcaaagtaggagaggtgaaagcagactggcttcactgctaa
DBGET
integrated database retrieval system
