Trichomycterus rosablanca: 134310260
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Entry
134310260 CDS
T09921
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134310260 (cdkal1)
Enzymes [BR:
trn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
134310260 (cdkal1)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
134310260 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
134310260
NCBI-ProteinID:
XP_062847878
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Position
3:complement(9390798..9741530)
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AA seq
558 aa
AA seq
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MPSACESLIDDIEDMVSANEPTSLQRSSVRQAVVPRARKRKEHAVTEELQADSVIPGTQK
VWLRTWGCSHNSSDGEYMAGQLAASGYEMTDDPSRADVWLLNSCTVKNPAEDHFRNSIKK
AQEQNKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGSKKDN
GKRLGGARLDLPKIRRNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLLELVKEIPEGCMLRLGMTNPPYILEHLEEM
AKILNHPRVYGFLHVPVQSASDSVLMDMKREYCCDDFSHVVDFLKEKVPGITIATDIICG
FPGETDEDFQQTMDLVKKYKFPSLFINQFYPRPGTPAAKIEQVPAHVKKQRTKELSGLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVAHNKFYEQVLVPKKLEFKGKMIEVVIYEAGKH
FMRGRPVEDATIVTPSISQPLQKGEISGLVQELKATVQNGLHASPASKGLVDGQGLKLLS
IGLALLAVVVVFILEKLH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgcctgcgagtctctcattgatgacattgaggacatggtgtctgccaatgag
ccaacatcactccagcgctcgtctgtaagacaggccgtcgttccgagggcacgaaaacga
aaagaacatgctgtcacagaggagctgcaagcagacagtgtgatccctggcacgcagaaa
gtgtggctgaggacgtggggttgctcacacaacagctcggatggagagtacatggctgga
cagctcgctgcaagcggctatgagatgacagatgatccatcccgtgcagatgtgtggttg
ctaaacagctgcacggtgaagaacccagcagaagatcacttcaggaactctatcaagaaa
gcccaggagcagaacaagaaggtggtgctggcagggtgtgttcctcaggctcagcccaga
atggactacctcaaaggcctgagcattatcggggttcagcagattgatcgagtggtggag
gtggtggatgaagcagtgaaaggtcactccgttcgtctcctgggttcgaaaaaagataac
gggaagcgactgggcggagctcgactggatttgccgaagatcaggaggaacccgctgatt
gagatcatttccatcaatacaggctgtctgaacgcctgcacgtactgcaaaaccaagcat
gctagaggagacctggccagctaccccatcgaggaactggtggaaagagccaggcagtcc
ttccaggagggtgtgtgtgagatctggctgaccagtgaagacacgggcgcgtacgggcgt
gacattggcactgatctgcccactctgctgttggagctggtgaaggagattccagagggc
tgcatgctccgcctgggcatgaccaacccgccatacatcctcgaacatctggaggaaatg
gccaagattctgaaccacccgcgggtctacggcttcctgcacgtccccgtccaatccgca
tcggacagcgtgttgatggacatgaagcgcgagtactgctgtgatgacttctcccatgtt
gtcgacttcctaaaggagaaggttccgggcatcaccatcgccaccgatatcatctgcggg
tttccgggagagacagacgaggatttccagcagactatggatctggttaaaaagtacaag
tttccaagcctctttattaaccagttctacccaagacctggaactcctgctgccaagata
gagcaagtcccagcccatgtgaaaaaacagcgaaccaaggagctgtctggactgttccac
tcctacaacccttacgaccataaggtcggtgagaggcagcatgtgttggtcaccgaggaa
tcttttgatgctcagtactacgtcgcccacaacaaattctacgaacaggtgctggtacct
aagaagctagagtttaaagggaagatgattgaagtagtaatctacgaggcgggaaagcac
ttcatgagaggtcggccagtggaggacgccaccatcgtcactccgtccatcagccagccg
ctgcaaaaaggagaaatctccggcctcgtccaggaattgaaagctacagttcagaacggc
ctccatgcctcgccggcgtcgaagggtttggtggatggtcaaggactcaaactgctttca
ataggattggctcttctggctgttgtagtggtttttattttagagaaacttcactga
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