Trichomycterus rosablanca: 134324460
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Entry
134324460 CDS
T09921
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00310
Lysine degradation
trn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134324460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134324460
03036 Chromosome and associated proteins [BR:
trn03036
]
134324460
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
134324460
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134324460
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
134324460
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134324460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
Zn-ribbon_8
zf-met
zf-C2H2_11
zf_UBZ
HalOD2
zf-RING_15
Zn_ribbon_SprT
zf-C2H2_jaz
zf_PR_Knuckle
zf-H2C2_5
zf-C2H2_3rep
Raffinose_syn
Siva
Motif
Other DBs
NCBI-GeneID:
134324460
NCBI-ProteinID:
XP_062862384
LinkDB
All DBs
Position
12:276596..282342
Genome browser
AA seq
488 aa
AA seq
DB search
METCTASDEQRSSCVEHLTPAEEQDEGFLMKTIKKEEDDDDDDDDYICGGMPLTVHQENG
DVLKNPVKEEEAEDDDHLYCEECRSFFINKCELHGAALFIPDSPVPIGVSDRARQTLPPA
LELQESDIPNAALGVFNKGEALPVGAHFGPYQGELVFREEAVNSRYSWVIYRSEQCEEFI
DARRETHANWMRYVNCAGNDEENNLVAFQYQGGIFYRCCRPIKAGQELLVWYDETYAKDL
GIVFERMWRMKCSAEEMKSFSCSLCILSYTSQIYLHKHIKSHHPEEYVRLLRSGQIKYED
MLPPSGSQGNNSCSRPRLKDVHRCSDCGKSFTHKSHFKQHLLIHTGEKPYHCTLCGKSFN
RKGTLKTHQRVHTGEKLYQCSQCGKNFSQKSNLKQHQRVHAEGKPYNCSQCGRSFNRKRS
LKLHQRIHTGEKPYRCSQCEKSFTQKGNLTQHQHIHTGEKVFPCSQCGRRFTHYSNLRRH
QHIHTTEK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtgtacagcttcagatgaacagagaagcagctgtgtggaacatctgactcct
gcagaggaacaggatgaaggattcctgatgaagacaataaaaaaggaagaagatgatgat
gatgatgatgatgattacatctgtggaggaatgccgctcactgtacaccaagagaacgga
gacgttttaaagaatcctgttaaagaggaagaagctgaggatgacgatcatctctactgt
gaggagtgtcggtcgttcttcatcaacaagtgtgagcttcatggtgcagctctcttcatc
cctgatagccctgtacccatcggggtctctgacagagccagacagactcttccacccgct
ctagagcttcaggagtctgatattcctaatgcagctctgggggtgtttaataagggggag
gcgcttccagtgggggcacatttcggaccctaccagggagaactggtgttccgagaggaa
gccgtgaacagtcgatactcctgggtgatatacagaagtgagcagtgtgaggagtttata
gatgccaggagagagactcacgctaactggatgaggtatgtaaactgtgccggtaacgat
gaagaaaataatctggtagcgtttcagtatcagggaggaattttctaccgctgctgtcga
cccataaaagcaggacaggagctcttggtgtggtacgatgagacgtacgctaaagatctc
gggatcgtgtttgagcgcatgtggaggatgaaatgctctgcggaagaaatgaaaagcttc
tcctgctccttgtgcatcctgtcctacacatctcagatttacctccacaagcacatcaag
agtcaccacccggaggagtacgtacgcctgctgagatcaggacagattaaatatgaggac
atgctgcccccctccggctctcagggcaataactcgtgctccagaccgagactgaaggac
gttcaccgctgctcagactgtgggaagagcttcactcacaagagtcacttcaaacagcac
ctcctcatccacacgggagagaagccgtaccactgcactctgtgtgggaagagtttcaat
cgcaagggcactctgaagacgcaccagcgcgttcacaccggagaaaagctgtatcagtgc
tcacagtgtgggaagaactttagtcagaagagtaatctcaaacaacaccagcgcgttcac
gccgagggcaagccgtataactgctctcagtgtggaaggagttttaatcgcaaacgttct
ctcaaactacaccagcgcattcacacaggagagaaaccctaccgctgctcacagtgtgag
aagagtttcactcagaaaggtaatctcactcagcaccagcacattcacactggagagaaa
gtgttcccctgctcacagtgtgggaggagatttactcactatagtaatctcaggcgacac
cagcacattcacaccacagagaaatag
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