Trichomycterus rosablanca: 134328653
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Entry
134328653 CDS
T09921
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
trn
Trichomycterus rosablanca
Pathway
trn04020
Calcium signaling pathway
trn04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
134328653 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134328653 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134328653 (grin2bb)
Ion channels [BR:
trn04040
]
Ligand-gated channels
Glutamate (ionotropic)
134328653 (grin2bb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
134328653
NCBI-ProteinID:
XP_062865877
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All DBs
Position
15:9211057..9355273
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AA seq
1751 aa
AA seq
DB search
MAVGLAMFKGQRLHFSAMLVSLDLFPSPLRTLSSPPRLHLFFFLLLLLLVLCPVCKSRRG
GGGMAGGGTTGNIIGPPHYPPANPVGAVPKLAQGLSIAVVLVGNSSEVTLAEGLEKEDFL
HVPLAPKLDLVTMNETDPKSIITRICALMSRHWLQGVVFGDDTDQEAIAQILDFISAQTH
IPILGIRGGSSMIMAAKDDNSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQ
DFVNKVRSTIENSFVGWELEEVLLLDMSVDDGDSKIQNQLKKLQSPVILLYCTKEEAATI
FEVAHSVGLTGYGYTWIVPSLVAGDADNVPNVFPTGLISVSYDEWDYGLEARVRDAVAII
AMATSTMMLDRGPHTLLKSGCHGAPEKKGPKGGNPNEVLRYLINVTFEGRNLSFSEDGYQ
MHPKLVIILLDKERQWDRVGKWENGSLTMKYHVWPRFELYSDAEERDDDHLSIVTLEEAP
FVIVEDVDPLSGTCMRNTVPCRKQLKALNQTVDSGIYIKRCCKGFCIDILKKIAKSVKFT
YDLYLVTNGKHGKKINGTWNGLVGEVVFKNAHMAVGSLTINEERSEVIDFSVPFIETGIS
VMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFIFEYFSPVGYNRCLADGREP
GGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMI
QEEYVDQVTGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYKEMHSYMTSFHQKNVD
EALYSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKDSGWKRS
VDLAILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDVDNMAGVFYMLGAAMALSLIT
FIAEHLFYWQLRFCFMGVCSGKPGLTFSISRGIYSCIHGVQIEENKSGLNSPSATMNMNM
NNTHSNILRLLRTAKNMTSVPGVNGSPHSGMDFGHRDSAVYDISEHRRSLAGHSDCKPPP
PYLPEDNMFSDYVSDVERTFGNLHLKDSNLYQDHYLHHHGGTGSGLALGMSGPLPNRPRS
LGSASSLEGGMYDCDSLGGGVAPIFTTQPRQSLTHRNREKFDLIAGHPTQSSFKSGLPDL
YGKFSFKGGASSSGFIAGHDRYCGGGGAGSGGDDGNIRSDVSDISTHTVTYGNLEGNAKR
RKQYRDSLKKRPASAKSRREQDEIELGFRRRTHHTIHHHHHHPVSQGHRSATPPVERKSQ
RGGNCSSYMFRDKDNLRDFYADQFRSKDGPSQWEHMDLSDTSGMGGGGGLGGGGCGGIVS
SGGGGGACTSLVPVDDFLKGKSKKTECKGGVGGSPGQQGHACWEKNIGGVGGLAGGDWEC
HNCHSGGNKPVCMHGGGGGVGGSGAGCGGSGQASSRPSSATCKRCDSCKKPGNLYDISED
NHLLVDQIGSKFPMEAGKGGSGGGGAQTQVQRRKFGPGGRVLRRQHSYDTFVDLQKEGAG
RMGGSGLGGGGGASMLPQPRSVSLKDRDRYMEGPSPYAQMFERYKGGERETTFFAGGDRS
KGGGSSFSLFQGGEGGLHRRSVGERDMRDRDKSMMGGGGMGGTRGVGTYSLSKSLYPDKV
NQNPFIPTFGDDQCLLHGAKSYYIKKQQAQQQTQQQQQLLDNNRADFRGSMGVTSYLPAS
ASSGVLSNVGPRFSKELCLAGPLGNHHGGAAGNNKLLSARDGLGMGQGQRPFNGSSNGHV
YEKLSSIESDV
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggcagttgggctggcaatgttcaagggacagcgtcttcacttctctgccatgcttgtc
agcctcgacctctttccctctcctcttcgtaccctctcctcacctccaagactgcatctg
ttcttcttccttctcctcctgttgctcgtcctctgcccagtctgcaagtcgcgacgaggt
ggagggggcatggcagggggcggtaccaccggcaacattatcgggccaccccactaccct
ccggccaatccagtgggagcggtgcccaagttggcgcagggccttagcatcgccgtggtg
ctggtgggtaactcaagcgaggtgacactggctgagggcctggagaaggaggacttctta
catgtgccactggcacccaagctcgacctggtcaccatgaatgaaacagacccgaagagc
atcatcacacgcatctgtgccctcatgtctcgccactggctacagggagttgtatttggg
gacgacactgaccaagaggctattgctcagatcctcgacttcatttcagcacagacccac
atccccattctgggcatccgtgggggctcctccatgatcatggctgctaaggatgacaac
tctatgttcttccagtttgggccgtcgatagagcagcaagcctccgtcatgcttaacatc
atggaggaatacgactggtatatcttctccatcgttactacgtactacccagggtaccag
gactttgtcaataaggtccggagcactatcgagaacagttttgtgggctgggaactggaa
gaggtgttgctgcttgatatgtcggtagatgacggcgactcaaagatacagaaccaactg
aagaagctgcagagtcctgtcatactgctttactgcactaaagaggaggccgccaccatt
tttgaggtggcacattcagtaggccttactggatatggttacacctggattgtaccatcg
ctggtagccggggatgccgacaacgtgcccaatgtctttcctacaggtctgatctcagtg
tcttatgatgagtgggactatgggctggaggcacgtgtacgtgatgctgtggcaatcatt
gccatggcaacctccaccatgatgttggatcgaggtcctcacacgctgcttaagtccggt
tgccacggcgcacctgagaagaaaggcccgaagggaggaaacccaaatgaagttctaaga
tacctcataaacgtaacgtttgaggggcgcaatctctccttcagcgaggacggataccag
atgcaccctaagctggttattattctgctggataaggagaggcagtgggacagggttggc
aagtgggagaacggctcactgactatgaagtaccacgtgtggccgcgttttgaactgtac
tcagacgccgaggagagggacgatgaccacctgtcgatcgtcacactggaggaggccccg
ttcgtcattgtggaggacgtggaccccctcagtggcacctgcatgaggaacacggtcccc
tgcaggaagcagcttaaagctctgaaccaaacagtagattcagggatctatattaagcgc
tgttgtaagggcttctgcatagacatcctcaaaaagatcgccaaatctgtgaaattcaca
tatgacctctacctggtgaccaacgggaaacacggcaagaagatcaacggaacttggaat
ggcttggttggcgaggtggtgtttaaaaacgcccacatggctgtaggctcactgaccatc
aatgaagagagatcagaggtcatcgacttttctgtccccttcatagagacaggcattagt
gtcatggtctctcgtagcaatggcactgtgtccccgtctgcttttctagagcccttcagt
gctgatgtctgggtcatgatgtttgtgatgctactgattgtatcagccgtggctgtcttt
atctttgagtacttcagtcctgttggttataaccgatgtctggcggacgggcgagagccg
ggtggcccctcgttcaccataggtaaggccgtatggctgctctggggtctggtcttcaac
aactctgtgcctgtacagaatcctaaaggcaccaccagtaagatcatggtgtcggtgtgg
gcctttttcgctgtcatcttcctggccagctacactgctaacctggctgccttcatgatc
caagaagagtatgttgaccaggtgacaggccttagcgacaaaaagttccagcgtccaaac
gacttctctcctccgttccgttttggcacggttcccaacggcagcacagagaggaacatt
agaaacaactacaaagagatgcacagctacatgaccagctttcaccagaaaaatgtagat
gaggctctttatagcctaaaatcgggtaagctggatgcgttcatctatgatgctgccgtt
ttaaactacatggcaggcagagatgaaggctgcaaactggtgacaattggtagcggatat
atcttcgctactacaggatatggtattgcaattcagaaagattcaggatggaagagatca
gtagaccttgccattctgcagttgtttggagatggtgagatggaagagctggaggcgctg
tggcttactgggatttgtcacaatgagaagaacgaggtgatgagcagccagctggacgtg
gacaacatggccggcgtcttctacatgctgggggcggccatggcgctgtcactcatcact
tttatagctgagcacctgttttactggcagcttcgcttttgcttcatgggcgtgtgctct
ggcaagccaggcctgaccttctccataagcagaggcatttacagctgtattcatggtgtt
cagatcgaggaaaacaaatcaggtcttaactccccatcagccaccatgaacatgaacatg
aacaacacccactccaacatccttcgtctgctgcgtacagccaagaacatgacctctgtg
cctggggtcaatggctcccctcacagtggcatggactttggccaccgagactcagccgtc
tatgacatcagtgagcatcggcgcagcctggcaggtcactcagactgcaagcccccacct
ccgtatttgcccgaagacaatatgtttagtgactacgtaagcgatgtggaaaggactttc
gggaacttgcatctgaaggacagtaacctgtaccaggatcattatcttcatcaccatggg
ggcacgggatctggactggctctgggtatgtcaggtcccttgcctaaccgacctcgtagc
ttaggcagtgccagctctttggagggagggatgtatgattgtgacagtttagggggaggg
gtagcccccatcttcaccacccagccccgccaatcactgacacacaggaacagggaaaaa
ttcgacctgattgcaggtcaccccacccagtcgagcttcaagtctggcctgcccgatttg
tatgggaagttttcctttaagggtggggcatcaagttcagggtttattgcaggacatgac
aggtactgtgggggaggtggggcaggctctggaggggatgacggaaatatacgctcagac
gtgtcggatatttccactcatacggtgacgtacggcaatctagagggcaatgccaagcga
cgcaagcagtacagagacagcctgaaaaagaggccagcgtctgccaagtcgcgccgagaa
caggacgagattgagctgggcttccgaaggcgcactcaccacaccattcaccaccaccac
catcatccagtttcacaaggtcaccgttcggctaccccacctgttgaacgcaagagccag
agaggaggaaactgctcctcgtacatgttccgtgacaaagataatctgagggacttttat
gccgaccagttccgatccaaagacgggccatcccagtgggagcacatggatttgagtgac
acttctggaatgggtggcggagggggtctgggtgggggcggatgtggcggcatagtcagc
agtggtggtggcgggggagcgtgcactagtctggttccagtggacgatttcttgaaaggt
aaatcaaagaagacagagtgtaagggtggagtgggaggatctcctggtcagcagggccat
gcatgctgggaaaagaacattggaggggtgggagggttggccggcggggactgggaatgc
cataactgccacagtggaggcaacaaaccagtttgcatgcatgggggaggagggggtgtt
ggtggatccggtgcaggttgtgggggcagcggacaagcctccagccgcccaagctcggcc
acctgcaagcggtgcgattcatgcaagaagccaggcaacctgtacgacatcagtgaggac
aatcacctccttgtggatcagatagggagcaagtttcctatggaggctgggaagggaggc
agtggaggtggaggggcccaaacccaggttcagaggcgcaagtttggcccagggggcagg
gtcttgcgcaggcagcattcgtatgacacatttgtagatttacagaaagaaggggcaggc
agaatgggaggctcagggcttggaggcggtggaggagcatctatgcttcctcaaccccga
agtgtgagtcttaaagacagggatcgctacatggaaggtccaagtccatatgcccagatg
ttcgagcgttataagggaggggagcgggagaccacgttttttgctggtggggatcggagt
aagggagggggctcatcatttagcttgttccaaggtggagagggtgggttgcaccgtcgc
tcggtaggtgagagggacatgagggacagggataaaagcatgatgggtggaggaggtatg
gggggtacccgaggggttgggacttactccttgtctaaatctctctacccagataaggtg
aaccagaacccattcatcccaaccttcggcgacgaccagtgcctattacatggcgccaaa
tcgtactacatcaaaaagcagcaggcacagcaacagacgcaacagcagcaacagcttctc
gacaacaaccgggctgacttccgaggctccatgggggtgacttcttatttgccagcctcc
gcctcatctggggttttgtccaacgtgggaccccggttttccaaggagctgtgcctggct
gggccccttggaaaccaccacggaggggcggcaggcaacaacaagctgttatcggcaagg
gacgggttaggtatggggcaaggacagagaccgttcaatggctcaagtaatggacacgta
tacgaaaagctctccagcattgaatctgatgtctga
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