Trichomycterus rosablanca: 134330178
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Entry
134330178 CDS
T09921
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134330178 (notch1a)
BRITE hierarchy
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NODP
Ank_4
NOD
Ank_5
Ank_3
EGF_3
DL-JAG_EGF-like
cEGF
JAG1-like_EGF2
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
134330178
NCBI-ProteinID:
XP_062867258
LinkDB
All DBs
Position
16:complement(7425452..7451575)
Genome browser
AA seq
2390 aa
AA seq
DB search
MEPCLNGGTCELNTNGQPGCRCPADFAGSQCQFPSPCSPSPCRNGGVCRPRTQGNDVEFT
CDCVLGFSGPLCLTPVNHACMSSPCRNGGSCSLLTLSTYGCRCPPGWTGKTCQQADPCAS
NPCGNGGRCSAFDSHFICTCPPSFHGPTCRLDVNECAVTPSPCQNGGACINEVGSYRCRC
SPEYAGAHCERPFRPCQPSPCANGGTCTQTSDTSYTCTCLPGFTGPDCEHNIDDCVQHSC
ENGGKCMDGVNTYNCHCDKHWTGQYCTEDVDECELSPNACQNGGTCHNTVGGFHCVCVNG
WTGDDCSENIDDCASAACYHGATCHDRVASFYCECPHGRTGLLCHLDDACISNPCQKGSN
CDTNPVNGKAICTCPPGYTGSACNQDIDECSLGANPCEHGGRCLNTMGSFQCKCLQGYEG
PRCEMDVNECKSNPCQNDATCLDQIGGFHCICMPGYEGMFCQINADDCASQPCLNNGKCI
DKINSFHCECPKGFSGSLCQVDVDECASTPCKNGAKCTDGPNKYTCECREGFTGSLCEID
INECASNPCHYGVCKDGLASFTCVCRTGYTGRLCEININECLSQPCRNGGTCLDRENSYT
CGCPKGTTGRNCEIDVDDCKSKPCDFGKCIDKLNGYECKCEPGYTGQTCNVNIDDCALSP
CRNGGTCVDGVNSFTCLCPEGFHDATCLSQRDECASNPCIHGSCQDQANSYVCVCEPGWT
GRNCDLNVNECLSNPCVNGGTCRDMTNGYICSCRAGFTGPNCQTNINECASNPCLNQGTC
IDDVAGYKCNCLLPYTGELCETVLAPCSTRPCKNRGVCHESDDYRSFSCACPPGWQGQSC
EVDINECVKSPCRNGGVCVNSMGGFQCRCNPGFTGDLCETDTDDCTPNPCSNGGVCVDRV
NGFTCVCVAGFRGERCTEDIDECVSAPCRNGGNCTDCVNSYTCSCPAGFNGINCEVNTPD
CTESSCFNGGTCVDGINSFSCLCLPGFTGSYCQHDVNECDSRPCVNGGTCQDGYGTYKCT
CPHGYTGTNCQSLVRWCDSSPCKNGGSCWQQGSSFTCQCASGWTGIYCDVPSVSCEVAAQ
QQGVSVAALCRNGGQCVDAGSTHLCRCQAGYTGSYCQEQVDECVPNPCHNGATCTDYLGG
YTCECVAGFHGVNCSKEINECASQPCQNGGTCIDLVNSYKCSCPRGTQGVHCEIDVDDCS
PDVDPETGEARCFNGGRCVDKVGGYGCVCPPGYVGERCEGDVNECLSDPCDPNGSYNCVQ
LVNSYRCECRTGYTGQRCDTVFDGCKDKPCKNGGTCAVASNTKHGFICKCPPGFSGSSCE
YDSSACGPLRCRHGATCMPGRPTPRCLCPPGFSGRECQTRLDSPCTSSPCYNGGTCQSSA
EAPFFRCLCPPHFNGLLCHILDYSFTGGQGLDITPPPSDSDEAVPHCEVAQCERRGGDGV
CDAACNNHECGWDGGDCSLNFDDPWHECSAALQCWRYFNDGKCDPQCQSAGCLYDGFDCH
QLEGQCNPLYDQYCKDHYSDRHCDQGCNSAECGWDGLDCAEDVPQRLAAGTLVLVVHVAP
TELLNSSSSFVRQLGALLRTNVAIRRDPTTGEPLIFPYYGNEHELSKHTRAAQEWNANPT
QLLQRATRSLSALLEPRLRRELDQTEIKGSIVYLEIDNRQCYQQSDECFQSATDVAAFLG
ALASSGNLDVPYIIEAVTSENESPGRGEMYPMFLALLALAVLVLAAVGVLMSRKRKREHG
QLWFPEGFQVTETKKKRREPVGEDSVGLKPLKNSDSTLMDEQLNEWAEEEHAKRFKFEDH
CTPDIGIPPDPRQWTQQHLDAADLRLTSIAPTPPRGDTDTDCVDVNVLGPDGMTPLMIAS
CSGETGELEEGEEGVIANFLWHGADPHQRTERAGETALHLAARYARSDAAKRLLESGADA
NAQDHAGRTPLHSAVAADAQGVFQILIRNRATDLDARMNDGTTPLILATRLAVEGMVEEL
INCHADSNAIDDSGKSALHWAAAVNNVDAAVVLLKTGANKDLQNNKEETPLFLAAREGSY
ETAKLLLDHLANRDITNHLDQLPRDIATERMHHDIVRLLEEYNLVQTASALTHSPPICSP
DAFLGIRTSPGANNCTNNTNNAKKPRKPGGKEGGKEMKIKKKKNAEQGIFSPADSEVSSP
PMMTSPFQQSSPIAHHLQGLTDSQIGGAHLGIGKPFDAAPPRLSHLPMANAAQTGACDWL
ARVQQQQRGGFPAVISTMHHSASLPQVMGYPTMQSSHLGTPAHLLSNHLQHQNSSSILAH
HFLGDLTGTELQSGHAPIQTVLPQETQRLASVMSSTQFLTPPSQHSYSNPMDNTTNHQGQ
LPDHPFLTPSPGSPDQWSSCSPHSNLSDWSEGISSPPTNIQMNRIPEAFK
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atggagccatgtctgaatggaggaacatgtgagctcaacaccaatggacagccaggttgc
aggtgtcctgcagactttgcagggtcccagtgtcagttcccgagcccatgcagcccatcg
ccatgccgcaacggaggtgtgtgccgcccgcgcacacagggcaacgacgtggagttcacc
tgtgactgtgttttgggttttagcgggccgctgtgtctcacgccggtcaatcacgcctgc
atgagctcgccatgccgcaacggcggatcctgttcactcctcacactcagcacctacggt
tgccgctgcccacccggctggacaggtaaaacgtgccagcaggccgacccgtgtgcgtcg
aacccctgtggcaacggcggccgatgctcagcgttcgattctcacttcatctgcacgtgc
cctcccagtttccacgggccaacatgtcgcctggacgtcaacgagtgcgcggtcaccccc
tcgccctgccaaaacggcggcgcgtgcatcaacgaggtgggctcataccgctgccgctgc
tcacccgagtacgccggcgcgcactgcgagcgcccgttccggccctgccagccgtcaccc
tgtgccaacggaggcacgtgcacacagaccagcgacactagctacacctgcacctgcctg
ccaggctttaccggcccagattgtgagcataacatcgatgactgcgttcagcattcatgt
gagaacggaggcaagtgtatggacggagtgaacacctacaactgccactgtgacaagcac
tggacaggtcagtattgcacggaggacgtggacgagtgcgagctctcaccgaacgcctgc
cagaatggtggcacgtgccacaacacggtcggtggcttccactgcgtgtgcgtgaacggc
tggaccggcgatgactgcagcgagaacatcgacgactgcgccagcgcagcctgctaccac
ggagccacgtgtcacgaccgcgtcgcttccttttactgcgagtgcccgcacggacgcacc
ggattgttgtgtcacttggacgatgcctgtatcagcaacccatgtcagaaaggctccaac
tgtgacaccaaccctgtgaacggcaaggccatctgcacctgcccgcccggctacactggc
tctgcctgcaaccaggacattgatgagtgctcactcggggccaatccatgtgagcacggt
ggccggtgcctaaacaccatgggttcatttcagtgcaagtgccttcaaggatacgagggg
ccgcgttgcgaaatggacgtgaacgagtgcaagtccaacccatgccagaacgatgccacc
tgccttgaccagattggtggattccactgcatctgtatgccagggtacgagggtatgttt
tgccagatcaacgcagacgactgtgcctcccagccttgtcttaacaatggcaaatgcatc
gacaagatcaattcctttcactgcgagtgtcccaaaggattctctggcagtctgtgtcaa
gtggatgtggatgagtgcgcaagcacaccgtgtaaaaatggagccaagtgcactgacggt
ccaaacaaatacacctgcgagtgcagagaaggttttacaggctcactgtgcgaaatcgat
ataaacgagtgtgcctcaaacccgtgccattatggcgtgtgtaaggatggcctggcctcg
ttcacatgtgtgtgccggaccggttacactggccgactctgcgagatcaacatcaacgag
tgtttgagtcagccatgccgtaacgggggtacctgtctggatcgggagaactcgtacacc
tgcggctgtcctaaaggaaccacaggtcgaaactgtgagatcgacgtggacgactgcaag
agtaaaccatgcgacttcggcaagtgcatcgacaagctcaatggctacgagtgcaagtgc
gagcctggatacacgggacaaacatgcaacgttaacatcgatgactgcgccctcagcccg
tgccgtaatggcggcacctgtgtggacggcgtaaactcattcacttgcctctgcccagag
ggcttccacgatgccacctgcctctcgcagcgagacgagtgtgccagcaacccctgcatc
cacggcagctgccaggaccaggccaactcgtatgtctgtgtgtgtgagccgggctggacg
ggccgcaactgcgatctaaacgtgaacgagtgcttgtccaacccctgcgtgaatggagga
acttgtagagatatgaccaatggctacatctgcagctgcagagcaggattcaccggtcct
aattgccaaactaacatcaacgagtgtgcgtccaacccctgcctgaaccagggcacctgt
atcgatgatgttgcgggatacaagtgcaactgcttgctgccttacactggtgagttgtgc
gagaccgttctggctccctgctccacacgtccatgcaagaacagaggcgtgtgtcacgag
tctgacgactatcggagcttctcctgtgcctgcccacctggatggcaaggtcagtcgtgt
gaggtagacattaacgagtgtgtgaagtctccgtgccgcaatggcggcgtgtgtgtaaac
tccatgggcggctttcagtgccgctgtaacccaggattcaccggagacctctgtgaaacc
gacaccgacgactgcactcctaacccctgcagcaatggtggggtgtgtgttgaccgcgtg
aacggcttcacgtgcgtctgtgtggccggattccgcggtgaacgatgcacagaggacatc
gacgagtgcgtaagcgccccctgccgcaatggtgggaactgcacggactgcgtcaacagc
tacacctgcagctgcccagctggcttcaacggcatcaactgtgaggttaacacacccgac
tgcactgagagctcctgcttcaatggtgggacgtgtgtggatgggatcaactccttttca
tgtctgtgtctgccgggctttactggcagctactgccagcatgatgtgaatgagtgcgac
tcgaggccgtgcgtcaatggcggaacatgccaggatggctatggtacctacaagtgcacc
tgcccacatggctacacgggcaccaactgccagagcttggtgcgctggtgcgattcatcc
ccgtgtaagaatggaggctcatgttggcaacagggctcctcttttacatgccagtgtgcc
agcggctggacgggcatctattgtgacgttcccagtgtcagctgtgaggttgcagctcag
cagcaaggtgtctcggtggcagctctgtgccgcaacggcgggcagtgtgtggacgcgggg
agcactcacttgtgccgctgccaggcaggctacaccggcagttactgccaggagcaggtg
gacgaatgtgtgccaaacccgtgccacaatggtgcaacctgtactgattacctcggtgga
tacacctgtgagtgtgttgctggcttccatggcgtgaactgcagcaaggagattaacgaa
tgtgcgtctcagccgtgtcagaatggaggtacctgcattgacctcgtcaacagctacaag
tgctcctgtcctcgaggaacgcagggagtccactgcgagatcgatgtggacgactgctct
ccagacgtggaccccgagaccggtgaggctcgctgctttaacggtggacgctgtgtggac
aaggtgggcggatacgggtgcgtgtgccccccaggctatgttggcgagaggtgcgagggg
gatgtgaacgagtgcctgtctgatccctgcgaccccaacggatcctacaactgtgtccag
ctggtcaacagctaccgctgcgaatgccgcacaggttatacaggccagcgctgtgacact
gtgtttgatggctgcaaagacaaaccctgcaaaaacggtggaacctgtgctgtcgccagc
aacacaaaacatggattcatctgcaaatgccctcctggtttctcgggctcgtcctgcgaa
tacgactcgagtgcgtgcggcccactacgctgccgccacggagccacctgcatgccgggc
cgccccacccctcgctgtctgtgcccgccgggcttcagtggccgtgagtgtcagacgcgt
ctcgactctccgtgcacctccagcccctgctacaacggcggcacgtgccagtcgtccgcg
gaggcgccgttcttccgttgtctgtgcccgccacatttcaacggccttctctgccacatt
ttggactactcgttcactgggggacagggcctggacatcaccccgccaccgtctgactct
gatgaggcggtgcctcactgcgaggtggcacagtgcgagcgccgaggcggcgacggagtg
tgtgacgcagcttgtaacaaccatgagtgtggctgggatggtggagactgctcactcaat
tttgatgacccctggcatgagtgcagtgccgccctgcagtgctggaggtacttcaacgat
ggcaaatgtgacccgcagtgccaaagtgccggctgcctgtacgatggctttgactgccac
cagctggaaggccagtgcaaccccttgtatgatcagtactgtaaggaccactactcagat
agacactgtgatcagggctgtaacagtgcagagtgcggttgggacggtctggactgtgcc
gaggacgtaccgcaaaggcttgccgccggcaccttggtgctcgtggtacatgtcgcgcca
accgaactcctaaacagttcctcctccttcgtgcggcagctcggcgcactactgcgcacc
aacgtggccatcaggcgcgatcccaccaccggcgagcccctcatctttccctactacggc
aacgaacacgagctgagcaagcacacgcgtgccgcccaggagtggaacgcgaacccgact
caacttctgcagcgggccaccaggagcctgtcggcgcttctcgagccacgtctacgacga
gaactggaccagacggagatcaagggctctatcgtgtatctggagatcgataacaggcag
tgttaccagcaatctgatgagtgtttccagagtgcgacggacgtagcggcgttcctcgga
gcgctggcctccagcggcaatctcgacgttccttacatcatagaagccgtaacaagtgaa
aatgaatcccccggcagaggtgaaatgtaccccatgtttctggccctgctggccctggcc
gtgctggtgctggctgctgttggagtactgatgtcacgcaagaggaagcgtgagcatggc
cagttgtggttcccagaaggctttcaagtgaccgaaaccaagaagaaacgcagagagcct
gtgggagaggactcggtcggactcaagcctttgaagaactctgatagcactctgatggac
gagcagctaaatgagtgggcagaggaagagcatgctaaacgctttaagtttgaggaccac
tgcacaccggacataggtatcccaccagaccctcgccagtggacccagcagcatctggat
gcggccgacctgcgcttgacctcgatcgctcctacgccaccacggggcgacacggacacc
gactgcgtagacgtcaacgtcctcggtcccgatggcatgacacctctgatgatcgcctcc
tgtagtggtgaaactggcgaactagaagaaggagaagaaggcgtgatcgccaacttcctt
tggcacggcgctgacccacatcagcgaaccgagcgcgccggcgagaccgcgctgcatctg
gccgcccggtacgcccgctccgatgccgctaaacgccttctagagtctggcgcagatgcc
aacgcgcaggaccacgccggacgcacaccgctgcattctgctgtggctgccgacgcacaa
ggagtcttccagatcctgatacgaaacagagcgacagatctggacgctcgcatgaacgat
ggcacgacaccgctcatcctggccacacgcctagcagtggagggcatggtagaggagctt
atcaactgccatgctgactccaacgcaatcgatgactccggcaagtccgctctccattgg
gctgctgctgtcaataatgtggatgctgctgtagtgcttctaaagactggagccaataag
gacctgcagaataacaaggaggagacccccctattcttggcagcccgcgagggcagctac
gagacggcaaagcttctcctcgatcacctggccaaccgagacatcacgaatcacctggac
cagctgccacgcgacatcgccaccgagcgcatgcatcacgacatcgtgcgtctcctggaa
gaatacaacctggtccagactgcttccgctctcacacactcgcccccaatttgctccccg
gatgcttttctgggcatcaggactagcccgggtgccaataactgcaccaataacactaac
aatgctaagaaacctcgcaaacctggaggaaaagagggaggaaaggagatgaagattaag
aagaagaagaatgcagagcagggtattttctctcctgcggattctgaagtgtcgtcccca
cccatgatgacctcaccattccaacaatcctcgcccatagcgcaccacctgcagggattg
actgattcccaaattggcggggctcatttggggatcggcaagccgtttgacgccgctcca
cctcgcttgtctcatcttccgatggccaatgccgcccaaaccggggcgtgtgattggctg
gccagggtgcaacaacagcagcgagggggattccctgccgtgatttctaccatgcatcac
agcgccagcctgccgcaagtcatgggctatcccacgatgcagagcagccacctgggcaca
ccggctcacctgttatccaaccacctgcagcaccagaactcgagctccattctcgcgcac
catttcctgggcgacctaactggcacggagctccagtctggacacgccccgatccaaacc
gtgctgccgcaggagacgcaacgtctggcttcggttatgtccagcacccagtttctgacc
cctccctctcagcatagctactccaatcccatggacaacacaacaaatcaccaaggacag
ctccccgatcacccattcctcacgccgtcgcctggctctcctgaccagtggtccagctgc
tcgccacattccaacctgtccgattggtccgagggaatctccagcccgcctaccaacatt
caaatgaatcgcatccctgaagcttttaagtaa
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