Trichomycterus rosablanca: 134334137 Help Entry 134334137         CDS       T09921                                  Symbol brip1 Name (RefSeq) Fanconi anemia group J protein   KO K15362   fanconi anemia group J protein [EC:5.6.2.3] Organism trn  Trichomycterus rosablanca Pathway trn03440   Homologous recombination trn03460   Fanconi anemia pathway Brite KEGG Orthology (KO) [BR:trn00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     134334137 (brip1)    03460 Fanconi anemia pathway     134334137 (brip1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:trn03400]     134334137 (brip1) Enzymes [BR:trn01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      134334137 (brip1) DNA repair and recombination proteins [BR:trn03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     BRCA1-B complex      134334137 (brip1)    FA (Fanconi anemia) pathway     Downstream FA components      134334137 (brip1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_2 Helicase_C_2 DEAD Motif Other DBs NCBI-GeneID:  134334137 NCBI-ProteinID:  XP_062872398 LinkDB All DBs Position 20:complement(13980329..14040511) Genome browser AA seq 1222 aa AA seqDB search MDTVEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNHGQHCLLESPTGSGKSLALLCSALA WQQAQYGKSDQDGDKSSCDSKKSNVTTPCQCVCHSQTTCPPTSSKSIASTSAVIDLTNDG PATKDVSPPGEKTNPPPVRSTLASKLSEKLQASSNTKEEQSDDDFKPDRKRIRAPAEDFM SRKRRCLEKGVVFIDDEDPERSVSGAQNWTVELNSHANAEGSLPSPAECCSPVPCSLCPC ASLTEGQKMGEKAKDKAKDNNGKQAIPKIFFGTRTHKQITQITHELKRTLYSSVPMTILS SRDHTCVHPDVVPHANRNERCKELLEAKNGRSCRFYHNVNKMREQSTLQWVHGLNQAWDI EELCRLGSKLRSCAYYAARELMQDANIIFCPYNYLLDPLIRASMDISLKGQIVVLDEAHN IEDCARECASFTLNQVQLKEGREELESMVTYNIRRSNHEPLLAFCCSLLNWIQESSSTLQ ERDYETACKVWTGKEVLVIFHGLGITADTFPVLQKHLEAVLEKEERVALVNGREDMVQVP TISSTTQIVLKSLFMVLGFLFRQNCRFADDYRVALQQSYVWATQQDVPDEQGFFARPRRR RQNTRTKTLVHTLSFWCLNPAVAFSDLSESVRSIVLTSGTLSPMGSFSSELGIKFSIQLE ASHVISKSQVWVGTIGAGPQGRRLCATFQHAETFAFQDEVGSLLLKVCQTMSRGVLCFLP SYKMLDKLRDRWMNTGLWEKLEERKTVIAEPRGGAKSDFDELLQTYYNAIKESGTRDGAL LIAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKYNDQHCKSRGLLPGGRW YEIQAYRALNQALGRCIRHRNDWGALILVDDRFRANPNKYITGLSKWVRQLVKHHDSFTN AMQSLVSFSECQQGVVQNQTVGPSPSVSGTQSSAVLSPPDPQVLPKSQSNEVQPDVPAVN NPSEPGDEKPPEHRPDEPSPKFKESTATTHKSKAILNLYTSTPVSSRYRTPIFKSNDRRR TTDQSSNSLAVIKDTDSTPDEAAKDQTKEALETSDITEIAPGSPVKSPSDCLPNQDVSAA APEDAEDETMFYTPELFEGEEDEESGAEEMDKASEIEPVQCTTINKCSESSSSIKPKQTE SMTTAPASPEEAAVRVSNDCVLSQSMAEQAGSSSSTGSRDRAQQHQSSSKSRRLSRSRQK APSKAEGKLTAYFTSLSQTSQP NT seq 3669 nt NT seq  +upstreamnt  +downstreamnt atggatacagtggagtataccataggaggagtgaagataaacttcccctgcaaggcctat ccctctcaacttgccatgatgaactctattgttcgtggcctgaatcatgggcagcactgc ttactggaaagcccaactggtagtgggaagagcctggctctgctgtgctcagctttagca tggcagcaggcacagtatggtaaatctgaccaggatggagataaatcctcatgtgacagc aaaaagtcaaacgttaccactccatgtcagtgtgtgtgccatagccaaaccacctgccca ccaacttcctctaagagtatagcatccacatctgctgtgattgatcttactaatgatgga cctgctactaaagatgtgtcacctccaggagaaaaaacaaaccctccgcctgttagatcc actttagcgtccaaactttctgaaaaacttcaggcctccagtaatacaaaggaagagcaa agtgatgacgactttaagcctgacaggaaacgtattcgggcacctgctgaggatttcatg agcagaaagcgtcgctgtctggagaaaggtgtggtgttcatcgatgatgaagacccggag aggtccgtgtcaggagctcagaactggactgttgagctaaacagccatgccaacgctgag ggaagcctgccgtcaccagccgaatgctgttctcctgtaccttgttctctttgtccctgt gccagcctaacagaaggccagaagatgggtgaaaaagccaaggacaaagccaaggacaac aatggaaagcaagcgatccccaagatattctttggtaccagaacacacaaacagatcacc cagatcacacacgagctaaagcggacactgtactcctctgtacccatgactatcctgtcc agccgggaccatacttgcgtccacccagacgtggttccacacgctaaccggaacgagcgc tgcaaggagctgctcgaggctaaaaacggccgatcatgcagattctaccacaatgtgaat aagatgcgggagcagagtactctacagtgggtgcacggactgaaccaggcctgggacata gaggagctctgccgtttgggcagtaagctgcgttcctgtgcttactatgcagcccgggag ctcatgcaagacgctaacattattttctgcccttacaactacttgttggatcccctcatc cgagcgagtatggacatcagtctgaagggtcagatcgtggtgctggatgaggcccataac atcgaggactgcgcccgggagtgtgccagcttcactttaaaccaagtgcagttgaaggag ggtcgtgaagagcttgagagcatggtgacatataacatccgacgaagcaaccatgagcct ttgctggccttttgctgcagtttgcttaactggatacaggagagctccagtactctgcag gagagggactatgagactgcctgtaaagtctggacagggaaagaggttttggttatcttc cacggtcttggaataacagctgacacttttcctgtgctgcagaagcatttagaagcggtg ctggagaaggaagaacgggtggcgctggtgaacggaagagaggacatggtgcaggttccc accatcagctccaccacccaaatcgttcttaagagtctcttcatggtgcttgggttcctg ttccgacaaaactgcaggtttgcagatgactaccgcgtggccttgcagcagagctatgtg tgggccacccagcaggacgtgcctgacgagcagggtttttttgcccggccacgtcgccgt cgccaaaatacccgcactaaaaccctggtgcatacacttagcttctggtgccttaatcct gctgtggcattctcagatcttagcgagtcagtacgcagtatagtgctcacttctgggacc ctttcacccatgggctccttctcttctgagctgggcatcaaattttccatccaactagag gctagccatgtcatcagcaaatctcaggtgtgggttggcacaatcggcgcaggtcctcag ggccgcaggctgtgcgccacgttccagcacgctgaaactttcgctttccaggacgaagtt ggcagcctcctgctgaaggtctgccagacgatgagccgaggcgtgctctgcttcctgcca tcttacaagatgttggataagctgagagaccgctggatgaacactggcttgtgggagaag ctggaggagcggaagactgtgattgcagagccacgtggaggagcaaagagtgactttgat gagcttttacaaacatattacaatgccatcaaagaaagtggcactcgagatggagctctg ctgattgcagtttgcagaggaaaagtgagtgagggcctggactttactgatgacaatgcc agagctgtggtcactattggcattcctttccctaacattaaagacctgcaggttgaactg aagatgaaatacaatgaccagcactgtaaatccagaggacttcttccaggaggacgatgg tatgaaatccaggcatatcgggccctaaatcaggctttgggaaggtgtatccggcataga aacgactggggggcacttattttagtggacgaccgctttagggccaatcctaacaagtat atcacaggcctgtcgaaatgggtgcgtcagctggttaaacaccatgacagcttcactaac gccatgcagtccctggtgtccttctccgagtgtcaacaaggagtagtgcagaaccaaact gtggggccttcccccagtgtctccgggactcagtcatctgctgtcttgtcacctcctgat ccacaagtgttgcccaagtctcagagcaatgaggttcagcctgatgttcctgctgtcaac aatccgtctgaaccaggtgacgaaaagcctccagagcatcgacctgatgaaccatctcct aagtttaaagaatccacagcaaccacacacaaatcaaaagcaatactcaacctgtataca tccactcctgtcagctcccgttacagaactcctatctttaaatctaacgaccgtaggagg accactgaccagagttcaaattcactagctgttattaaggacactgattcaacacctgat gaggcagcaaaggatcagaccaaagaagctcttgagaccagtgacattactgagattgca cctgggtctccagttaaatcgccctcagactgtctccccaatcaggacgtcagtgcagca gcacctgaagacgcagaggacgaaactatgttctacacgccagaactgtttgaaggggag gaggatgaggagtctggtgcagaagagatggataaagcctctgagatagaaccagtccaa tgcactacaataaacaagtgttcagaaagtagttcctctattaaacctaagcagactgag agtatgacgactgctcctgctagtcctgaggaagctgctgtgcgtgtcagtaatgactgt gtgttgtctcagagcatggcagaacaggcagggtcgagctctagcacaggcagtagggac agggcccaacagcatcagagcagcagcaagtcacgtaggctctccaggtctaggcagaaa gcaccaagcaaagctgaaggtaaactcactgcttactttacatcactctctcagaccagc cagccatag

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