Triplophysa rosa: 130549911
Help
Entry
130549911 CDS
T09216
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130549911 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130549911 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130549911 (grin1b)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Glutamate (ionotropic)
130549911 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
DUF3663
Motif
Other DBs
NCBI-GeneID:
130549911
NCBI-ProteinID:
XP_057183237
LinkDB
All DBs
Position
LG2:24331677..24358098
Genome browser
AA seq
937 aa
AA seq
DB search
MRLVLLAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANSIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSS
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKTKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgctcgcctttctcatctcgtgctcctgtgcgagaggtggatgcgaa
ccgaagactgtgaatatcggggctgtcctgagccagaagagatatgaacaagtgttcaaa
gacgctgtcactcaagccaacagtatatacggcaaagataagttcaagatgaacgctatt
tcagtcactcataaaccaaatgcgatccagatggcactgtccgtttgtgaagacctcatc
tccaaccaggtttatgcgatcttggtgagccacccgccccagtccaatgaccatctgacc
cccacaccagtgtcctacacagcaggtttttaccgtataccagtggtgggcctcacaaca
cgcatgtccatctattcagataagagtatccacctctctttcctgcgcacggtacctccc
tactctcaccaagcccaggtgtggttcgacatgatgcgcgagttccagtggaatcacatc
attctgattgtgagcgacgaccacgagggaagagccgcacagaaaagactggaaaccctg
ctggaggagagggagacgaagaataaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagtcaagacacaaat
ctgacggctctgctccaggaagccaaggagctggaggctcgagttatcatcctgtcctcg
agtgaagacgaggcggcggccatttacaaagcggcgcgccagctcaacatgacaggctct
ggttacgtgtggttggttggagaaagggagatgtctggtaaagcattgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgac
gccgtggctgtggtggcccagtccatccaggagctctttgagaaggagaatatcacagag
cctccacgaggttgtgttggcaatacaaacatctggaagactggcccactctttaaacga
gttctgatgtcatccaagtatccagatggcctgacaggccgcgtggagttcaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaaccagactggtgcaa
gtgggcgtctacaatggctcgcaagttgtaatgaacacgcaaaggaagattatctggccg
ggaggagaaactgaaaagccgaaaggctatcagatgtcaaccagattaaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccgactctacgtgatggaacttgtaaggaa
gaatacacagtaaatggagtcctgatcaaaaaagtgatctgcactggccctaatgagacc
attccaggtcgcccaatagtacctcagtgctgctatgggttctgcattgacctcttgatc
aaacttgccatgacaatgaacttcacctatgaggtgcatctagtggctgatggaaaattt
ggcactcaggagcgggtaaataacagcaacaagaaggagtggaatggcatgatgggagaa
ctcctgagtggtttggcagacatgatcgtggctccacttacaattaacaatgaacgagcc
cagtacatcgagttctcgaaaccgttcaagtaccaggggcttacaatccttgtcaaaaag
gaaattccacgcagtacactggactcgttcatgcagccctttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccatttggaaggtttaaagtaaatagtgaagaggaggaagaagatgccctcaccttatct
tctgcgatgtggttctcctggggcgtgctactgaactccggcattggagaaggtgccccg
cggagcttttcggcgaggattttaggtatggtgtgggctggtttcgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaaattcatctacgccacagtg
aagcagagctctgtggacatttacttccggcgccaggttgagctgagcacaatgtaccgc
cacatggaaaagcacaactacgagagcgccgcggaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagccgtgttggagtttgaggcctcgcaaaaatgc
gacctggtcaccacaggtgagctgttcttccgctctggattcggtattggcatgcgtaaa
gacagcccatggaagcaaaatgtctcgctggccattctcagttcccatgagaatggcttt
atggaggacttggataaaacttgggtccgctatcaagagtgtgactccagaagcaatgca
ccggccacgctcacttttgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gttgccgggatcttcctcatcttcatcgaaatcgcctataagcgacacaaggacgctcgt
aggaagcagatgcagctggcctttgcagcggttaatgtctggaggaagaacctacaggat
aggaaaagtggtagagcagagcccgaccccaaaacgaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccatatcccacg
gatataaccggccagctcaacctttcagacccatcagtgagcacagtggtgtga
DBGET
integrated database retrieval system
