Triplophysa rosa: 130553391
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Entry
130553391 CDS
T09216
Symbol
grin2ab
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130553391 (grin2ab)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130553391 (grin2ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130553391 (grin2ab)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Glutamate (ionotropic)
130553391 (grin2ab)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
130553391
NCBI-ProteinID:
XP_057188311
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All DBs
Position
LG4:complement(5276171..5345263)
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AA seq
1444 aa
AA seq
DB search
MMGAVVRFTILWAFLGWSQAAEKPPSLSVAVILGQTPTVSESAMRPVRGVGAPLEVTVLS
VQVNQTDPGSMLTHLCELMSRQRLHGLVYGDGTDQEAVAQMLDFVSSQTSMPILGIHGGA
AMTMAEKDSSSSFFQFGASLQQEALLMLAIMEEYDWHVFSVVTTKFPGYQEFIATVRVTV
DHSFIRWDLQSVVTLDGVGEPEDRAHVQLKRIQSPVILLYCSKAEAALVFDEAHSLGLTG
AGFVWIVPSLITGNLEHTPEAFPMGMISVAYDEWDYPLETRVQDAVGIISSAAAAMFREE
GRIPDGTASCSGQSEKPEVPPSALRRYMMGVRLGGRDHSFMDDGYQMNPKLVVIVLNTQR
DWEKMGRWENHTLRLKFPVWPRYNSFGDMDADENHLSIVTLEERPFVIVDDVDILTGTCM
RNSVPCRKHIKDNTTQGSYIKKCCKGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNI
WNGMVGEVVYKKAIMAIGSLTINEERSEAIDFSVPFVETGISVMVSRSNGTVSPSAFLEP
FSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLLWGLV
FNNSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDRKFQS
PYSYSPPFRFGTVPNGSTERNIRKNYPDMHQYMVKYHQNGVLDALVSLKTGKLDAFIYDA
AVLNYMAGRDDGCKLVTIGSGYIFATTGYGIALQKGSYWKRLVDLAILGIIGDGEMEELE
AQWLTGICHNEKNEVMSSQLDVDNMAGVFYMLAAAMALSLITFVWEHLFYWRLRYCFTGL
CSGRPGMLFTISRGIWSCIHGVHIEMKKPPELGFSPQANMLHLLKSAKEITTLGVTSPKQ
PMSILPNTSGLLDLMGGGKGNNLSQKNAAYSNTSTMLSNRLKEPLNNTLLPGQRALSITD
AQPGVAGNGGSGGGGETARPPASKPRALWKKSVETLRQTQSPGDNSPPSAAPASETLPMK
SQRYLPEDAPARSDVSDCSGRVDLQKQQKLKETLRKRNRQPRDLSDVELSTLRSQPSQQS
NHSAQIYSQSSQGSQIYTIDSIDQEHGLHYPDIFSDHRDNMHRPPSSSEQQPIIQLNSSL
LTQAHEPDVMQTAIAKDKKYNTYGKPGGAGNIAGGPAQDPRQTHCRSCLSKVSSYSGLYT
VRSPQYRCDACMHSAHLYDISEDQFLRPDGRGIGGGSVDRAFSPYLPQPDASFTAYLPQS
DQEGDGLISHYQNEGVIIRRQHSYENLPQKSSSRRVSLQDSTPYANIPSATLIPDKPPKN
PSAHLNHTLAGVGVSGLGIGRRSKSMYPARPTENPFLQTLRDDQRLAHGRSSTDIYKQLV
PLTLGQADGNMLGMGMPTPDLYYAEHVMPYVAPPPVGTYTAPRALSAGGARRVYKRMPSI
ESDV
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagctgtagtccggttcacaatcttatgggctttcctgggttggtcgcaggct
gcagagaagcctccatccttaagcgtggctgtgattctaggccaaacccccactgtatcc
gaatcggccatgcgtccggtgcgtggggtaggtgcgccgctggaggtgaccgtgctcagc
gtccaggtgaaccagacggacccgggaagtatgcttacgcacctgtgtgagcttatgtcc
cgtcagagactgcacgggctggtttacggagacggcacggatcaagaagccgtggcgcag
atgctggactttgtttcgtctcagacgtcaatgcccatactgggaattcacggtggcgct
gcgatgaccatggcggagaaggattccagttcttcatttttccagttcggagcctccctc
cagcaggaggcgctgttgatgctcgccataatggaggagtacgactggcacgtcttttct
gtggtcaccactaagttcccaggttaccaggagttcatagctactgtacgcgtgacagtg
gaccacagctttattcgttgggaccttcagagcgtggtgacgctggacggcgtcggcgaa
cccgaggaccgggcccacgtgcagctgaaacgcatccagtcgcccgtcatactactctat
tgctccaaagccgaagcggcgttggtcttcgacgaagcccattcgttggggctcaccggg
gctggttttgtgtggattgttccaagtctcataacaggaaatctcgaacataccccagaa
gcctttccaatggggatgatatctgtggcgtacgacgagtgggattatcccttggagacg
cgcgtgcaggacgctgtgggaattatcagttctgcagccgctgccatgtttcgggaggaa
ggtcggatacctgatgggacagcaagttgctccggccaatcagagaagccagaggtgccg
cccagcgctctgcgaagatatatgatgggcgtccgtctagggggtagagatcattcattc
atggacgatggctaccagatgaaccccaaactggttgtcattgttctgaacacacagagg
gactgggagaagatgggacgatgggagaatcacacgttgaggttgaagtttccggtgtgg
ccacgttacaactcgttcggggacatggatgccgatgagaaccacttgagcatagtgaca
cttgaggaaagaccctttgtcatagtggatgacgtggacattctcactggtacctgcatg
cgtaactcggtaccgtgcaggaagcacattaaagataacaccacccagggttcctacatc
aagaagtgctgcaagggcttctgtatagatatcctgaagaagattgcaaggaatgtcaaa
tttacctatgatctttacctggtcactaacggtaaacacggtaaaaagatcaataacatt
tggaacggcatggtgggagaggtagtctataaaaaggccataatggccatcggctcattg
accataaatgaagagcgttcagaggccatagacttctctgtcccattcgtcgagaccggc
atcagtgtgatggtgtcccgtagcaacggaacggtgtcgccctccgcatttctagaaccc
ttcagtgcttcagtgtgggttatgatgtttgtcatgttgctcatcgtcacagcaatcgct
gttttcctctttgaattcataagtcctctcggtttcaatagaaacctggcacagggcaaa
gacccacacgggccctccttcaccatcggtaaggccgtctggcttctgtggggtctggtg
ttcaacaactctgtcccggtacagaacccgaaaggcaccacaagtaaatttatcgtgtcc
gtgtgggcctttttcgctgtgatcttcctggctagctacactgccaacttggcggccttt
atgattcaagaagaatttgtggaccaagtcacaggcctcagtgacagaaagtttcaaagt
ccctattcctactcgccaccgtttcgctttgggacggtgcctaatgggagcacagagcga
aacatcaggaagaactaccctgacatgcaccagtacatggtcaaataccatcagaatgga
gttctggatgcactggtcagccttaaaactggaaaactggatgcttttatttacgatgct
gctgtgctcaactatatggcgggacgtgatgatggctgtaagctggtcactattggcagc
ggctacatctttgccacgacgggatatggaatcgccctgcagaagggatcctactggaag
cggctggtcgacctcgctatccttgggattattggagacggtgagatggaggagctggag
gcccagtggctcaccggtatctgtcataatgagaagaatgaagtgatgagcagtcagctg
gatgtggataatatggctggtgtgttctatatgctggcggcagccatggctctgtcgcta
attacttttgtctgggagcacctcttctactggaggctacgctactgtttcactggcctg
tgttccggtcgaccaggaatgctcttcactatcagcagggggatttggagttgcattcac
ggcgtccatatcgagatgaaaaaaccaccggagttgggcttcagccctcaggccaacatg
ttgcacctgctgaaatccgcgaaagagatcaccaccctgggagttacctcacccaaacag
cccatgagtatcctccctaatacatctggcctgctggatttaatgggtggaggaaaaggc
aacaacctgtcccagaaaaacgcggcctatagcaacaccagcaccatgctcagcaaccgt
ctcaaagagccacttaacaacacactgttgccagggcaacgtgccctgagcataacggat
gctcaaccaggtgttgctggaaacggtggctcgggaggcggaggcgagactgcacgacct
cccgcttccaaaccacgtgctctgtggaagaaatcggtcgagactctacgacagacacaa
agcccgggggacaattcccccccatctgccgcgccggcctccgagaccctgcctatgaaa
agccagagatacctacccgaggatgcacccgcccgttcggatgtgtcagattgctctggc
cgagtggacctgcaaaagcagcagaagttaaaagagacgcttcgtaagcgtaaccgccag
ccacgagacctgagcgacgtggagctgtcgacgctcaggagtcagcccagccagcagagc
aaccacagcgcccagatctactctcaaagcagccaggggagtcaaatatacaccattgac
tccatcgaccaggagcacggactacactacccagatatcttcagtgatcaccgtgacaac
atgcaccgcccaccctcgtcctctgagcaacagccaatcatccagctcaacagcagtctg
cttacccaggcccacgaacccgacgtaatgcaaactgcgatcgcaaaagataaaaaatac
aacacgtacgggaagcccgggggagcggggaacatcgccggtgggcccgctcaggaccca
cgacagacgcactgccgtagttgcctgtcaaaggtgtccagttactctgggctttacacc
gtacggtcccctcagtatcgctgcgatgcctgcatgcactctgcgcacctctatgacatc
agcgaagatcaattcctccgtccagatggaaggggtattggtggtggaagtgttgacaga
gccttctctccttatcttccccagcccgatgcttccttcacagcctatcttccccagagc
gaccaggaaggcgacggtcttattagccactaccagaacgagggagtgatcatccgccgc
cagcactcttacgagaacctgccccagaagagttcgtcgcgtcgcgtcagcctgcaagac
agcacgccgtatgccaacattccctccgcgacactgatcccagacaagccccccaaaaat
ccgtcggcgcatctaaaccacacgctggcgggggtgggcgtcagcggactcgggatcggc
cgtcgcagcaagtcgatgtatccggctcgcccgacggaaaatccgtttctccagacgctc
cgtgacgatcagcgtctggctcacggccgcagctccacagacatttataagcagctggta
ccgctcacattaggccaggctgacggcaacatgctcggcatggggatgccgacccctgac
ctctattacgccgagcacgtcatgccttatgtagcccctccccccgtcggtacatacacg
gcccccagagcgttgagcgctgggggcgctcgccgtgtctacaagaggatgccgagcatc
gagtccgatgtctga
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