Triplophysa rosa: 130561226
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Entry
130561226 CDS
T09216
Symbol
grin2ca
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130561226 (grin2ca)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130561226 (grin2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130561226 (grin2ca)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Glutamate (ionotropic)
130561226 (grin2ca)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
130561226
NCBI-ProteinID:
XP_057201401
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All DBs
Position
LG11:5117242..5176303
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AA seq
1397 aa
AA seq
DB search
MGVHLGCLSDTLWLPLLLLLSVSSVPRCQGRPYRTVEPTVNVAVVFSGSSYQMEIKGRLS
RENFLDLPLEVNPITVLVNNTNPRTLLTRICDTLAANRVHGVVFEDNIGSEAVAQILDFM
STQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEYNWDSFVVVTSL
YPGYDTYVYYIRSFIDTSYFLWELQDILTFDMSADGMNDLRARRLLQQIDAQVLLVYCSH
DEAQYLFSMARDVGLVGPGYIWFIPSLAVGNPNMHPPDSFPIGLISIITDRWKMSMRNRV
RDGVAIVVKGVESFRKQRGFIPDGHMDCQSAVQPAKNDTLYRHMLNVSWENTDFSFNSDG
YLVNPSMIIITLDRSRQWDKVGNYEFGILQMRYPVWPRYGTYLETVSDNRHLTVATLEER
PFVIVEAVDPVTGTCLSNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIK
FSYDLYLVTNGKHGKLVRGVWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVETG
ISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNRSLVSAK
DPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAF
MIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEMHAHMVKYNQKG
VEDALNSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKESRWK
RPIDLALLQFLADGETQKLQTVWLTGICRNEKKEVMSSKLDIDNMAGVFYMLLVAMGLSL
LVFAWEHLLYWKLRHSVRRSERLDFLLAISRGIYSCYNGVEDTDRNGNLQNPDVTTSYTQ
ANMLKMLQTAKDIVSSTRVENSLDNATKTIENWSRRDPESARTSLPTCLIGTDFSHSRLP
CISSVTDNHSSYPQNVDGTAQHLLEKPHVGIRPTSLRYTLPARTSQHHIYERALPISSLS
TPHIAIRDPPPPTAPKPHMYVDPSCHHPTSRYVPYRDFQVPDIFVENQELSGSHKQYKAG
LSRQKRSHSYVAASPETRRRDDYDVPQSCLADLKCNHLMENHSHTTPCMRSHYQRTTSSC
NSCTKLYLEPDMDDIPLLGKDKINRRASFLRATWGGDRIRQVDEKPTTSASSSNMPDLFP
RVLMTNPKPSKMYGSAGNNHRYNMAVEPAYLDPAHMGSYPYKPQKIKYSTSIRLPSYREA
ILQNTAALRRSSSTLVHGHYSTYLNSYTDMPVYLGPLPQGPAHFHDHSKDMCHLFPCVNH
CPDNAALVPRLGSRHTAYQSTAIGGYEGPGRSNEQLLHTVPVSSVRRDRRQVLVARNVHS
PYTPRPWGRVSSLESEV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttcatctagggtgtctcagcgacacactgtggctgccgttgctgctgctgttg
tccgtcagctccgtcccccgttgccagggccgaccgtacaggacggttgagcccaccgtg
aacgtggcggtggtcttcagcggctcctcctaccagatggagatcaaagggcgactgagt
cgggagaacttcctggacctgccgctggaggtgaaccccatcaccgtgctggtgaacaac
accaacccgcgcaccctactgactcgcatctgcgacacgctggctgctaacagggtgcac
ggagtggtctttgaggataacattgggtcggaggcagtggcgcagatcctggacttcatg
tcgacgcagacggcggtgcccatagtgggcatcagcggggggtccgctgttgtcttaccg
cacaagggtgacggctctacgttccttcagctgggttcttccattgaacagcagatcaat
ggcatgtttaaggtgatggaggagtacaactgggacagttttgtggtggtgaccagcttg
tacccgggctacgacacgtacgtgtactacatccgctcctttatcgatacttcctacttc
ctgtgggagctgcaagacatcctaacgttcgacatgtccgcggacggcatgaacgatctc
cgagcccgaaggttacttcaacagatcgacgctcaggtgcttctggtgtactgctcgcac
gatgaagcccaatacctgttctccatggccagggatgtgggattggtcggtccagggtat
atttggtttattccaagcctggctgtgggaaaccccaacatgcatccaccagacagtttt
cccatcggattgattagtataatcacagatcgctggaaaatgagcatgcggaacagggtc
agggatggtgtggccattgtcgtcaaaggagtggagagcttccgcaagcaaagagggttt
attcccgacggacacatggactgtcagagtgcggttcagccggctaaaaatgacaccctt
tacaggcacatgctgaatgtgtcgtgggagaacacggacttttccttcaacagtgatgga
tatctggtcaatccctccatgatcataatcactctggaccgcagcaggcagtgggataag
gtgggaaattatgagtttggtatactgcaaatgagataccctgtctggccacgttacggg
acttacttggagaccgtgtcggataaccgtcacttaacagtcgccacgttagaggaaagg
ccttttgtcattgtagaagctgtggatccagttaccggcacctgcctcagcaacactgtt
ccctgcagacgccaatcaaacaagacagaaacgattgttggacacaccgagccctacacc
aaactctgctgcaagggcttctgcattgacattctgaagaaactctcacgcaacatcaag
ttctcctacgacctctacctggtcaccaacggtaaacatgggaaactcgtacgtggggtt
tggaacggcatgatcggagaggtgttttatagaagagcagacatggccatcggctctctc
accataaatgaggagcgctctgagatcatcgacttctctgtgccgtttgtggagactgga
atcagtgtgatggtggccagaagcaatggaacagtttctccgtccgctttcctggagcca
tacagcccggccgtgtgggtgatgatgtttgtcatgtgtcttactgttgttgcaatcact
gtgtttgtgttcgaatacttcagccctgtgggctacaaccgcagtctggttagtgccaaa
gatccaggtggaccaacattcaccattggaaagtcagtctggctgctgtggggaatcgtc
tttaacaactcggtgcccattgaaaaccccaagggcaccaccagtaagatcatggtgctg
gtgtgggccttctttgccgtgatcttcctggccagctacactgctaacctggcagccttt
atgatccaggagcaatacatcgacactgtgtccgggctgagtgacaaaaaattccagaag
ccacaagaccagtatcctccattccgattcggtacggtgcccaacggcagcacagaacga
aacatccggagcaattatccagagatgcatgctcacatggtgaagtacaaccagaaaggt
gtggaagacgccctcaacagcctcaaaaccgggaagttggatgccttcatatacgatgca
gctgtgctgaactacatggctggaaaagatgaaggatgtaaactcgtgactatcggtagt
gggaaggtgtttgcaactacaggttacggtatcgcgcttcagaaagaatctcggtggaag
cgacccattgatctggctcttctccagttcctcgctgatggtgaaactcagaaactccag
accgtgtggttgactggcatctgtcgtaatgagaaaaaagaggtgatgagttctaaactc
gacatcgacaacatggccggagtgttttacatgcttctggtggccatgggtctcagtctg
ctggtctttgcttgggaacatctgctgtactggaaactgagacattctgtccgcagatct
gaacgcttggacttcttattggccatcagcaggggaatctacagctgttataacggtgtg
gaggacacagaccgtaatgggaacctgcagaacccagatgtcaccaccagctacactcag
gccaacatgctgaagatgctccagacggctaaagacattgtctcatccacgagagtggaa
aattctttggacaacgccaccaagaccatcgagaactggagtcgcagagaccccgagtct
gccagaacaagtcttcccacctgcctcataggaactgacttcagccacagtcgcctcccc
tgcatttccagcgtcacagacaaccattcctcttaccctcaaaacgtggatggcactgct
cagcacctgctggagaagcctcacgtggggatacggcctacctcactgcgctacaccctt
cccgcacgaaccagccaacatcacatttacgaacgagcgcttcccatatctagcctcagc
actccccacatcgccataagagacccgccgcctccgacggccccgaaaccccacatgtac
gtggatccgtcctgtcaccaccctacctctcgctacgtcccgtaccgtgattttcaggta
ccggacatcttcgtggagaaccaggaactttcgggaagccataaacaatacaaggcaggt
ctcagtcgacaaaagaggtcccacagctacgtggcggcgtctccagagactcgacggagg
gacgactatgacgttcctcaatcctgtctggccgatcttaaatgcaaccatctcatggaa
aaccattcccacaccacaccctgcatgagaagccactaccagagaaccacgtcaagctgc
aactcctgcacaaagctgtatctagaaccagacatggatgacattccacttctggggaag
gacaaaatcaaccgccgcgcctcttttctcagggccacgtggggtggcgaccgcatccgg
caggtggacgagaagcccaccacctctgcatcttctagcaacatgcctgaccttttcccg
agagttttaatgacgaatcccaagccctcgaagatgtacgggagcgccggcaacaatcat
cgttacaacatggcggtggaaccagcctatctggacccggcccatatgggctcctacccg
tataaaccacagaagatcaagtactcaacgtccatccgtcttccatcataccgggaggca
attctacagaacacggcagccctgcgtcgttcctcctccacactagtgcacggacactat
tcgacgtacctgaactcgtacacggacatgcccgtgtacctggggcctttaccgcaggga
cccgcccatttccacgaccactccaaagacatgtgccacttgtttccctgcgtcaaccat
tgcccggataacgctgccctggtgcccaggttaggcagcagacacacggcgtaccagagc
acagctattgggggctacgaggggcccgggcgctcgaatgagcagttgctgcacaccgtg
ccagtgtcttctgtgcgtagggaccgcaggcaggttctagttgcacggaatgtacacagt
ccctacaccccgaggccctgggggagggtgtctagtctggagtcagaggtgtga
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integrated database retrieval system
