Triplophysa rosa: 130567577
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Entry
130567577 CDS
T09216
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tros
Triplophysa rosa
Pathway
tros00310
Lysine degradation
tros01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130567577 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130567577 (prdm6)
03036 Chromosome and associated proteins [BR:
tros03036
]
130567577 (prdm6)
Enzymes [BR:
tros01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
130567577 (prdm6)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130567577 (prdm6)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130567577 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-H2C2_2
Zap1_zf1
zf-C2H2_11
Cucumo_2B
zf-C2H2_jaz
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
130567577
NCBI-ProteinID:
XP_057211728
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Position
LG17:complement(23340620..23364523)
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AA seq
540 aa
AA seq
DB search
MLKPSEPSGSAFLKVDPTYIQHWQQLFPQNPLKTAALENLRQRPNLISSTSSASVPAPSS
APSVSSLAGLSQLAVPQIALFGQSDSSGTGGSCQARELSNFQNDRASRLKLSSEELDFYL
YGQQRMEIIPLNNHCGDVHNRCDMCADNRNGECPMHGPLHSLRRLVGTSSASAAVPPPEV
PEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGPFQGVSLPLDKAQSGPVRNTRH
LWEIYDQEGALQYFIDGNEPSKSSWMRYIRCARHCGEQNMMVVQYRSCIFYRACTDIPRG
TELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVIEAMSRQETLQSFSKSPKSSSLVLQR
SLVFPQTPSSRSFSLLDKSGHNVTESVLNQMSSKNQRVLASPTSTSQLSSEFSDWHLWKC
GQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCG
RAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPISESSESIEVD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgagcgagcccagcggttctgctttcctcaaagtggacccgacttacatc
cagcactggcagcagctgttcccgcagaacccgctgaaaacagccgcgctggagaacctc
cgacagagacccaacctcatctcctcgacctcatcggcatctgtaccggcgccctcgagc
gctccctccgtgtcgtctttagcgggtttgagtcagctcgcggtgccgcagatcgcgctg
ttcggacagtcggacagcagcggcaccggcggctcgtgtcaggccagagaactttcaaac
tttcagaatgatcgcgcgtcccgtctgaagctgagctccgaggaactggacttctatctg
tacggccagcagaggatggagatcatccctctaaacaaccactgcggagacgttcataac
cgctgtgacatgtgtgcggacaaccggaacggggagtgccccatgcacggccccctgcac
tcgctgcggaggctggtggggaccagcagcgcctcggcagccgttccccccccagaggtc
ccggagtggctgagggatttgccccgtgaggtgtgtctgtgcaccagcaccgtcccgggt
ctgggctacggcatctgtgcagcccagcgcatcccacagggcacctggatcgggcccttc
cagggagtgtctctaccgctggacaaggctcagtccggtcccgttcgaaacacaagacac
ttatgggagatttatgatcaggagggagcgctgcagtacttcattgatggtaatgaaccc
agtaaatccagctggatgagatacatccgctgtgccagacactgtggagaacagaacatg
atggtggtgcagtacaggtcgtgtattttctaccgggcgtgtacagatattcctcgtgga
acggagcttctggtttggtataatgacagctatacgtctttctttggaattccgctgcag
tgcatcgctcaggatgaaaacttaaatgtgccgactactgtaatagaggccatgagtcga
caggagacgcttcagtctttcagtaaaagtcccaaatcctcttcactggttctgcagcgt
tcactggtgtttccccagacgccctcctcacggagcttctctctcctggacaagagcgga
cacaacgtcacagagtccgttttgaaccagatgagctcgaaaaaccagcgcgtgctggcg
agtcccacctccaccagtcagctgagttcagagttcagtgactggcatctgtggaaatgc
ggccagtgcttcaaaaccttcactcaacgcattctgctgcagatgcacgtgtgcacgcaa
aaccccgacagaccgtatcagtgtggacactgttctcaatccttctctcaaccctcggag
ctgaggaatcacgtggtgacacactccagtgaccggccctttaaatgcggctactgcggc
cgggcgttcgctggggccacgactctcaacaaccacatccgcacacacacgggagagaag
cctttcaagtgcgagagatgcgaccgcagtttcacgcaggccacgcagctcagcagacac
cagcggatgcccaacgagtgcaaacccatcagcgagagcagcgaatcaatcgaggtggat
taa
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