Triplophysa rosa: 130569934
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Entry
130569934 CDS
T09216
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tros
Triplophysa rosa
Pathway
tros04020
Calcium signaling pathway
tros04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130569934 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130569934 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tros04040
]
130569934 (grin1a)
Ion channels [BR:
tros04040
]
Ligand-gated channels
Glutamate (ionotropic)
130569934 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
130569934
NCBI-ProteinID:
XP_057215895
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Position
LG19:complement(17821237..17847806)
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AA seq
946 aa
AA seq
DB search
MRLLLLVAFFSCFCVRGGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENQDQLYDNKRGPKAEKVLQFNQETNLTALLLEAKELEARVIILSAS
EEDAAAVYKTARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHISDA
VAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDG
DRKYAHYSILNYQKTRLIQVGIYNGTQVVMNKQRKIIWPGGETERPRGFQMSTRLKIVTI
HQEPFVYVKPTTLEGTCKEEYTPNGVLIKKVICTGPNETIPGRPIVPQCCYGFCVDLLIK
LAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINKERAQ
YIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSP
FGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVA
SYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRH
MEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKD
SPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIA
AGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRTDSDPKK
KPSFRSISTNLASSIKRRRSSKDTQFPPTDITGQLNLSDPSVSTVV
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcttctgttagtcgcgtttttctcctgcttctgcgtgcggggcggctgcgaa
cccaagattgtgaacatcggggccgtcctgagccagaagagatacgagcaggtgtttaaa
gatgccgtcacccaggcgaaccaggtgtacggacgggataaattcaagttgaccgccatc
tctgtcactcacaaagccaacgccattcagatggcgctgtcggtgtgcgaggatcttatt
tccagtcaggtgtacgccatccttgtaagccatccaccacaatctaatgaccatctcact
cccacgccagtgtcctacactgcgggattctacaggatccctgtagtggggctcaccacc
aggatgtccatttattcagacaagagcatccatctctcattcctgcgtacagtgccaccc
tactctcaccaggcacaggtgtggtttgacatgatgcgcgagtttcgctggaatcacatc
attctaatcgtcagtgacgaccacgaaggccgtgctgcgcagaaaagactagaaacgctg
ctggaggagcgagaaaccaagaataaaaaaaggaactatgagaaccaagaccaactgtat
gacaacaaaagaggacctaaggccgagaaagtgcttcagttcaaccaggagactaacttg
accgctctgctcctggaggccaaagagctggaggcccgagtgatcattctgtctgccagt
gaggaagacgcagccgccgtgtacaaaacagcacgctttctcaacatgacaggctcaggc
tacgtgtggctggtgggggagcgcgagatgtccggtaaagctttgagcgaggcccctgac
ggcctgatcggcctccagcttatcaacggcaagaatgaatctgcgcacatcagcgacgcc
gttgcagtcgtagcccaatccatccaagagctcttcgagaaagaaaacatcacggaaccg
ccgaggggctgcgtgggcaacaccaacatctggaaaactgggccactctttaaaagggta
ttgatgtcatcgaagtacccggagggcctgacgggacgtgttgagtttaatgacgacggc
gacagaaaatacgctcattacagcattctgaactaccagaagactagactgattcaagtt
ggcatttacaacggaacacaggtagtgatgaacaaacagaggaagatcatttggccggga
ggtgaaaccgagagaccgagaggattccaaatgtctactcgcttaaagattgtgaccatt
catcaggaaccctttgtgtatgtaaaaccaaccacgttggagggaacctgcaaggaagag
tacacaccgaatggagtcttaataaaaaaggtgatctgcactggaccaaatgagaccatc
ccaggacgcccaatagtaccccagtgttgctacggattttgcgttgatctcttgatcaag
ttggcgatgaccatgaacttcacctacgaagtacacctggtggcagatggtaaattcgga
actcaggaaagagtgaataacagtaacaagaaggaatggaatggcatgatgggagagctc
ctgggtggcttggccgacatgattgtagctccgttgacaattaataaagaacgagcccag
tacatcgaattctccaaacctttcaaatatcagggactcactattcttgttaaaaaggaa
attccccgcagtacgctggactcgtttatgcagccattccagagcacactgtggctactg
gtgggtctatcggtgcatgtggtggcggtgatgctttacctactagaccgattcagccca
tttggaaggtttaaagtaaacagcgaagaagaagaagaagacgccctcaccttatcttcc
gctatgtggttctcctggggagtcttgttgaactctggaatcggagaaggtgccccgcgt
agtttttcagcaagaatcttgggaatggtgtgggccggcttcgctatgataatagttgca
tcctatactgccaacctggctgccttcctggtgttggatcggcctgaggaacgcatcacc
ggcatcaatgacccgaggctgaggaacccatcagacaagttcatctatgccacagtaaag
cagagctcggtggatatttacttccgccgtcaagttgagctgagcaccatgtaccgccac
atggagaagcacaactacgagagcgcggcggaagccattcaggctgtccgggacaacaag
ctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgcgac
ctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaaggac
agcccctggaaacagaatgtgtccctggctattctcagttcccatgagaatggcttcatg
gaggaccttgataaaacctgggtgagataccaggagtgtgactcaagaagcaatgcccca
gccacactcacttttgaaaatatggcaggtgtcttcatgcttgtcgctggtggcattgcg
gccggaatcttcttaatcttcattgagatcgcatataagcgccataaagacgcccgcagg
aagcagatgcagctagcctttgcggccgtcaacgtttggaggaagaacttacagccctct
tcctctgtagagactcaggatgataggaaaagtggtagaacagacagcgacccaaaaaag
aaaccctcttttaggtccatcagtaccaacctggcctccagcatcaagagacgtaggtcc
tccaaagacacgcaattcccaccaacagacattacgggccaactcaacttgtctgacccg
tctgtcagcacggtggtgtga
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