Trichoderma reesei RUT C-30: M419DRAFT_98951
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Entry
M419DRAFT_98951 CDS
T06031
Name
(GenBank) insert subdomain of RNA polymerase alpha subunit
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03020
RNA polymerase
trr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M419DRAFT_98951
09124 Replication and repair
03420 Nucleotide excision repair
M419DRAFT_98951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_98951
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_98951
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
M419DRAFT_98951
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
M419DRAFT_98951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ETS02129
JGI:
TrireRUTC30_1_98951
UniProt:
A0A024S9V5
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MDALHYDSMAIDGEPEQPQVKISAADSTRVDFELSRTNLPFANALRRVIQAEVPTIAIDL
VEMEVNSSVLADEFIAHRLGLIPLDSKGVNELNYSRDCDCEQYCEQCSVSLTLHAKCTSD
EIMKVYARDLVVDGRHANSVGSPIITDPDGLGCLIAKLRKDQELKITCIAKKGIAKEHAK
WMPTSAVGFEYDPHNKLHHMDMWFENNTDPEKEWPKSKYAEWEEPPQEGEPFDYDAVPNR
FYFEVEASGTMEPDLIIQGGIRVLQQKIGALLKGLDPRKYGGDDADMDGPRSPDMNMDGG
TTPWGQDGGYTTPYGNNTAYGGGNTAYGGGTSYGGGATAYGSSTAYGGSSTAYGGSGSGG
SGYGSGPYSQGNAWQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctgcactacgactcgatggccattgatggggagccggagcagccccaggtg
aaaatctcagcggccgacagcacgcgcgtggactttgagctctcgagaaccaacctgccc
ttcgccaacgccctgcgacgagtcatccaggccgaagtgcccacaatcgccatcgacctg
gtggaaatggaagtcaacagctctgtcctggcggacgagttcatcgcccaccgactcggc
ctcatccctctcgactccaagggggtcaacgaactcaactactcccgcgactgcgactgc
gagcagtattgcgagcaatgcagcgtaagcctcacgctgcatgccaaatgcacaagcgac
gagattatgaaggtgtacgcccgcgatctggttgttgatggacgccatgccaactcggtc
ggaagccccatcatcaccgaccccgatgggctggggtgcctgattgccaagctgcggaag
gaccaagagttgaaaatcacttgcattgccaagaagggaattgcaaaggagcacgcgaaa
tggatgccaacgtcggcggttggctttgaatacgatcctcacaacaagctacaccacatg
gatatgtggtttgagaataacacagatccagaaaaggagtggccaaagagcaagtatgct
gaatgggaagagcctcctcaagagggagaacccttcgattatgatgcagtgcccaaccgc
ttctactttgaggtggaagcgtcaggaaccatggaacccgacctgatcatccagggtggc
atccgagtgctgcagcaaaagattggcgctctgctgaaggggctcgacccgcggaaatac
ggcggcgacgacgccgatatggacggcccgcggagtcccgacatgaacatggatggcggc
accacgccgtgggggcaggacggcggatacacgaccccttatggaaacaacacggcgtac
ggaggcggcaacacggcctacgggggaggtacttcctacggtggtggcgcaaccgcctat
ggaagcagcacggcatatggcggcagctcgacagcgtacggcggttctggatcgggcggc
tcgggatacggatcggggccgtatagccagggtaacgcttggcagtaa
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