Takifugu rubripes (torafugu): 101065624
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Entry
101065624 CDS
T02386
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101065624 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tru04090
]
101065624 (vcam1)
04091 Lectins [BR:
tru04091
]
101065624 (vcam1)
CD molecules [BR:
tru04090
]
Proteins
101065624 (vcam1)
Lectins [BR:
tru04091
]
I-type lectins (Siglecs)
101065624 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
ICAM1_3_5_D2
C2-set_2
Ig_C17orf99
ICAM_N
Motif
Other DBs
NCBI-GeneID:
101065624
NCBI-ProteinID:
XP_029683703
LinkDB
All DBs
Position
20:16698372..16703470
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AA seq
824 aa
AA seq
DB search
MQQISMFDRGVLQIISALLLMSSCCVRGLHVDLFPKRPLLKLGERQQLVCRVQDCLGVLS
VSWSSLEDRPLTATTTTNESHSVLTFDPVMIEHEGALLCRVNCGGEGRQVKTSVHVYSFP
SAPVISGGDHLTLGEESTLSCQVSGVYPAELITLTLIKGDAVLQSTTGEPGTSLVQSRYL
LQPEKGDTGAQITCRATLDLQDLLFEERIKESSVTLNVLYAPIVMVTSHSVVVTTGAPLN
LTCLAEGNPKPTISWSLRRESGRSEGRSQNGQLVLLSVSPADAGFYVCEATNTKGSQSAD
VELLVHAPPTNISLTVSPGEEVLEGQNVTFTCRSDGVPPATLVLKKEGVELERTDPASDP
ELTFSLSALMDDSAQYQCEASNQYGTQVVTRSISVRAHPLQVELSPTAPVVEQGSGLVLT
CRSSGCLQRPIWTWRWLEHSHNQEQDQEQDPKWSVLQKSHAQDGESVLHLQNMDFLDQGE
YSCEARCDNVVRYKTTHIQVLSVLPDPLLEDPGPVLLDSEAVFHCDVTNVFSVNLIRIQW
KIGNTVMKTETFKFFGFSQNISSVLYLEIKDDHRFLSCKAELLTKDGSVWSSKMAGVLLE
VHYPPRRTSLSVRPEEEVLEGQNMTFTCRSDGVPPTTLVLKKEGVELYRKGPAPELTFSL
CSALMDDSAQYQCEASNQYGSQVVTRTVSIRAPPRDTTVLILPSAVVPEGENVTICCHTI
SFPLPTMVLKKLANGIEQHSSTGTFVLVNVKARDSGLYQVNVTNSLGHQVRVFSLSVTER
STLGAVTITLVCVAAALVAAALLLSYIRRSKKKGFYQLPRSSSA
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagatctccatgtttgaccgcggagtgcttcaaataatttcagctttgctgctg
atgtcatcatgttgcgttcgtggccttcacgtggacctgttccctaagcggcccctgctg
aagctgggtgagcggcagcaactggtgtgtcgggttcaggactgtctcggggtgctcagt
gtgtcctggtcgtccctggaggaccgccccctcaccgccacgaccacgaccaatgagtcg
cactctgtgctgacctttgacccggtgatgattgaacacgaaggggcactattgtgtcgg
gtaaactgtgggggggaagggaggcaggtcaagacctcggtacatgtatactccttccca
tcagcccctgtgatcagtggaggtgaccacctgacgttgggggaggagtccacgctctcc
tgccaggtgtctggtgtgtaccctgcagagctgatcacccttaccctgattaaaggggac
gctgtcctgcaaagcactacgggagaacctggaaccagcctggtccaatccagatacctg
ctgcaaccagagaaaggtgacaccggggcccagatcacctgcagggccacgctggacctg
caggacctgctgtttgaggagaggatcaaagagagcagcgtcactctcaatgttctctat
gctcctattgtcatggtaacgtcgcactctgtggtggtgacgaccggtgctcctctcaac
ctaacgtgtctggcagaaggaaacccaaagccgacgattagctggagcttaaggcgagag
tcgggtcggtccgaggggcggagccagaacggtcagctggttctcctgtcggtgagtccg
gctgatgctggattctatgtttgcgaggctacaaacacgaagggaagtcagagtgcagat
gtggagctcctggttcatgctccgcccaccaacatctccctgacggtgagcccaggtgag
gaggtgttggagggtcagaacgtgaccttcacctgccgctcagacggagttcctcctgcg
acgctggtgctgaagaaggagggggtggagcttgagcggacagaccctgcatctgaccct
gagctgaccttcagtctctccgccctgatggacgactccgcccagtaccagtgtgaagcc
tccaaccaatatgggacccaagtggtcactcgctctatcagtgtcagagctcatcctctg
caggtcgagctttctcccacggctccagttgtagaacaaggttctggtttagttctgacc
tgtagatcttcaggatgtctgcaacgtcccatctggacctggaggtggctagaacacagc
cacaaccaggagcaagaccaggagcaagacccgaagtggtcagtactccagaagtcacat
gctcaggacggcgagtcagtgctccacctgcagaacatggacttcctggatcagggtgaa
tacagctgtgaggccaggtgtgacaacgtggtccggtacaaaaccacccacatccaggtt
ttatcggtcctgcctgatccacttctggaggatcctggtcctgtccttctggattcagag
gctgtctttcactgcgacgtcaccaatgtcttttcagttaatctgatcaggatccagtgg
aagattgggaacaccgtgatgaagaccgagacgttcaagtttttcggtttctcacagaac
atctcatccgtactttacctagaaatcaaggacgatcatcggtttttgtcctgtaaagcg
gagctgctgacgaaggatggcagcgtgtggagctccaagatggctggcgtcctgctggag
gtccactatcctccacggagaacctccctgtcagtgagaccagaggaggaggtgctggag
gggcagaacatgaccttcacctgccgctcagatggagttcctcccaccaccctggtgctg
aagaaggagggggtggagctttacaggaaaggccctgcacctgagctgaccttcagcctc
tgctccgccctgatggacgactccgcccagtaccagtgtgaagcctccaaccaatatgga
tcccaagtggtcactcgcaccgtcagcatcagggctcctcccagggacaccacggtcctc
atcctaccctctgcggttgttcctgagggagagaacgtcaccatctgctgccacaccatc
agcttccctctacccaccatggtcctgaagaagctggccaacggcatagagcagcactcc
tccaccgggaccttcgtcctggtcaacgtgaaggccagggactcgggcctgtaccaggtc
aacgtgaccaacagcctgggccaccaggtgcgagtgttcagcctcagcgtgacagagagg
agcactctgggcgccgtcaccatcacgctggtgtgtgtggctgctgccttggtggccgct
gctctgctgctcagctacatcaggaggtccaagaagaaaggcttctaccagctgccccgg
tcctcttcagcctga
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