Takifugu rubripes (torafugu): 101079573
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Entry
101079573 CDS
T02386
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tru
Takifugu rubripes (torafugu)
Pathway
tru03020
RNA polymerase
tru04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101079573 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101079573 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tru03021
]
101079573 (polr3a)
Enzymes [BR:
tru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101079573 (polr3a)
Transcription machinery [BR:
tru03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101079573 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101079573
NCBI-ProteinID:
XP_003961288
Ensembl:
ENSTRUG00000013488
UniProt:
H2UBT0
LinkDB
All DBs
Position
1:complement(4634456..4646631)
Genome browser
AA seq
1390 aa
AA seq
DB search
MAKEQFRETDVAQKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLAYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHIGYFKAIIGILQMICKTCSSIMLNRE
EKLQFMDQLKRPTLTYLQKRGLKKKISEKCRKRTVCLNCSAFNGPVKKCGLLKIIHEKYK
TNKKVVDPFVSDFLQSFDIAIEHNKVLEPLLSRAQENLNPLVVRNLFKRISREDIPLLLM
NPEAGTPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPERVNKANLELMRKLVRNGPEVHPGANF
IQNRFTQIKRFLKYGNREKIAQELRLGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKSCQIVASILVGKDEKVRISLPRPAIMKPMALWTGKQI
FSVILKPSKECPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQSLLKAKHDLLDDG
YMKCDEYIDALQTGKLQQQPGCSAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCSDEPALSQNELVLTADAITKRADFLC
CRDSFLEEIKKFVKGFSERIKKTRDKYGINDNGTSEPKVLYQLDRITPTQLERFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKEDLPKVV
VQGIPEVARAVIHIDEQSGRNKYKLLVEGDNLRAVMATHGVNGSRTTSNNTFEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAEKEPSPAKRPLLFD
NPDFHIPLNT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggaacagtttagggagacagatgtggcccagaaaataagccacatctgcttt
gggatgaaatctgcggagcagatgcggcagcaggctcatatccaggtggtcagtaagaat
ttatacagccaagatacctcacataccccactggcttatggagtcttggaccaccgtatg
ggcaccagtgaaaaggacaggccctgtttgacatgtgggaagaatctagcagattgcttg
ggacattatggatacttggatctggagctgccatgtttccacattggctatttcaaagcc
attattggaatcttacagatgatatgtaaaacctgctcaagcatcatgctgaacagggag
gagaaactgcagttcatggatcagctgaaaaggcccaccctgacctatctccagaaacga
gggctaaagaagaagatctctgaaaaatgccgcaaaaggacagtctgtctgaactgttcc
gcctttaatggacctgtgaaaaagtgtggcctgctcaagatcatacatgagaagtataaa
acaaacaagaaagtggtggatccttttgtgtccgacttcctgcagtcttttgatatcgcc
attgaacacaacaaagtgttggagcctctgctgtccagagcacaggaaaacctgaaccct
ttagtggttcggaacctgttcaaacggatttccagggaagatatccccctgttgctgatg
aaccctgaggcagggacccctgcagatctcatcctcacccgcctcctggtgcctccgctc
tgtatacggccgtctgtcgtcagcgacctgaagtcgggcaccaacgaggacgacctcacc
atgaaactcacagagattattttcctcaacgacgtcatcaaaaagcatcgaatgacaggg
gcaaagacccaaatgatcatggaggactgggacttccttcagctgcagtgtgccctctac
atcaacagtgagctgtctggcatccccctaaacatggcaccaaagaagtggaccagagga
tttgtgcagagacttaaggggaagcaaggccgatttagaggaaacctctcaggaaaaaga
gtggacttctctggcagaacggtcatttcccccgatccaaatctgcgtattgatgaggtg
gctgtccccgtgcacgtggccaaaatcctgacatacccagagagggtgaacaaagccaac
ctggagctaatgaggaaacttgtacggaatggtcctgaagttcatcctggtgccaatttt
atccagaatcgctttacgcagattaaaaggtttttaaaatatggaaaccgcgagaagata
gctcaggagcttaggctgggcgacgtcgtggaaaggcacctgatagacggagacatcgtg
ctcttcaatcgacaaccgtccctgcacaaactcagcatcatggcccatattgccagagtc
aaacctcacaggacgttccggttcaacgagtgtgtgtgcactccttataatgctgacttt
gacggtgatgaaatgaaccttcacctgccccagactgaagaagccaaagctgaggctctt
gtcctgatggggacaaaagccaaccttgtcactccgagaaatggggaacctctgattgct
gctattcaggactttctgacaggagcatatctcttgaccttgaaggacacattctttgac
agatcaaaatcttgtcagattgtggcatcaattcttgtggggaaagatgaaaaagtcagg
atctctctcccccgtccagctataatgaagcccatggccctgtggacaggcaaacagatc
ttcagcgtcattctgaagcccagcaaggaatgtccagtcaatgccaacctgaggacaaag
ggcaaacaatactgcggcaaaggggaggatctgtgtcacaatgactcgttcgtcgtcatc
cacaacagcgagctgatgtgtgggagcatggacaagggcaccttggggtctggatcaaag
aacaacatcttctacatcctcctgagggactggggtcagctggaggcagcaaatgccatg
tcccgcctagcaagacttgccccggtgtatctgtccaatcgcggcttttccatcggaatc
ggcgatgttacacctggtcagagtctcctgaaggccaaacacgaccttctggatgatggt
tatatgaagtgcgacgagtacatcgacgctctgcagacggggaagttgcagcagcaaccc
ggctgctccgcagaggagacgctggaggcgctcatcctgagggagctgtctgtcatcaga
gaccgagctggcagcgcctgcctcagagagctggacaagagcaacagccccctgatcatg
gctctttgtggctccaaaggatccttcatcaatatctcccagatgatcgcctgtgtgggc
cagcaggctataagtggctcccgagtgcctgatggttttgaaaatcgatcactgcctcac
tttgaaaaacactccaaactacctgctgctaaaggctttgtggccaacagcttctactct
ggcctgacgcccacagagtttttcttccacactatggccggtcgggaaggtctagtggac
acagcggtcaaaactgcagaaactgggtacatgcagagacgtctggtgaagtccctggag
gatttgtgctcgcagtacgacctgacggttcgcagctccaccggcgacatcattcagttc
atctacggcggcgatgggctggaccccgccgccatggaggggaaggatgagcccctagag
tttaaaagagtcctggacaacattcgggcggtttacacatgctcggatgagcctgcgctc
agtcagaacgagctggtcctcactgcagacgccatcacgaagagagccgacttcctgtgc
tgcagagacagcttcctggaggagatcaagaagtttgtcaagggcttctcggaacgaatc
aagaagaccagagacaaatacggcatcaacgacaacggcaccagcgagccaaaggtcctg
tatcagctggaccggataacacccacccagctggagaggttcctcgaaacttgcagagac
aagtacatgagggctcagatggagccaggctccgccgtcggggctctttgtgctcagagc
atcggtgagccaggcactcagatgacccttaaaaccttccacttcgccggcgtggcctcc
atgaacatcactcttggggtcccgcgcatcaaagagataatcaacgcttctaagaacatc
agcacgcctataatcacggctcatctggacgtggaggacgacgccgactttgccagactg
gtgaaggggaggattgagaagacccttctgggagagatctcggagtacatagaagaggtc
tttctacccgatgactgtttcatccttgtgaaattgtcactggagagaataagattgctg
cgattggaggtcaacgcagagaccgtgcgttattccatttgtatgtcgaaactgcgagtg
aagccgggcgacatcgccgtgcacggcgaggcggtggtgtgcgtgtctccacgggagaac
agcaaaagctccatgtactacgtgctgcagtcgctcaaagaagaccttcccaaggtggtg
gtgcaaggcatccctgaagtggcccgagctgtcattcacattgacgagcagagcggcagg
aacaagtacaagctcctggtggagggggacaacctgagagccgtcatggccacgcatgga
gttaacggaagccggactacttccaacaacacgtttgaggtggagaagactctgggaatt
gaggccgcccgttccacaatcatcaacgagattcagtacaccatggtgaaccacgggatg
agtatcgaccggcgtcacgtcatgctcctggcagacctcatgtcctacaagggggagatt
ctgggcatcaccaggttcggcctggcgaagatgaaggagagcgtcctcatgttggcctct
tttgagaaaacagccgaccatcttttcgacgccgcttattttggacaaaaggattccgtc
tgtggagtgtccgagtgcatcataatgggaatcccgatgaatatcggaacaggactgttc
aaacttttacacaaggccgagaaggagccctctccggctaaaagacctcttctctttgac
aatccggatttccatatacctctcaacacgtaa
DBGET
integrated database retrieval system
