Thiothrix subterranea: HMY34_15680
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Entry
HMY34_15680 CDS
T07831
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
tsb
Thiothrix subterranea
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsb03016
]
HMY34_15680 (mnmC)
Enzymes [BR:
tsb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
HMY34_15680 (mnmC)
Transfer RNA biogenesis [BR:
tsb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HMY34_15680 (mnmC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
GIDA
Pyr_redox
Pyr_redox_2
Methyltransf_30
3HCDH_N
FAD_binding_3
FAD_binding_2
Pyr_redox_3
HI0933_like
Lycopene_cycl
ApbA
FAD_oxidored
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QQZ30086
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Position
3177922..3179529
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AA seq
535 aa
AA seq
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MQELPTTASEQRLQDNQLPQRWRGKSQFTIAAPRFGTGVDFLTTWQAWQADPQRCARLHF
IAIEPHPLQPATLRELLANYPELQPFAAELIAHYPPLLDGFHRLTFAQGHLTLTLCFMAL
PTALSELVARVDVWYSPEHLIPALEPWYALPAPSPVTHANVIGGGIAGCQIAHALAKRGW
EVTLYERHTRLAMEASGNRAGVLTPKMTAEAGWGETFYRQAFLFAVQQIRQLQAAGQAID
WAQCGALQLAHEPREAARQQALRVRELPADFIQILDQAEASAVAGIPLPSGASYFPQAGW
LNPASLCAALVAHPNIEVRTLTDASVLPMDGVTIIASGREADRFAASQFLPFMPVLGQTS
AATASAFSQQLKTTLGHEGYLTPALAGQHIFGATFVRNRREPRLDAAADTVNHQQLAQYL
PAFAASLGTVQTSHAAIRMTTPDRYPVVGALPDVAFFQQAYAELRHGRANQPFPLAHYQP
SVWIAAGFGSRGLTTSGLCAELLAALLTGEPLPMQATLYRHLHPARFLIRQLKRG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaattacccaccaccgccagcgaacaacgcctgcaagataaccaactcccgcag
cgttggcggggcaaatcccaattcaccatcgccgccccccgcttcggcacgggcgtagac
ttcctcaccacttggcaagcatggcaagccgacccgcagcgttgcgcccgcctgcatttc
attgccatcgaaccgcacccccttcaacccgcgaccttgcgtgagttattggcaaattac
ccggaattgcaaccctttgccgctgaactcatcgctcactatcccccgctgctcgacgga
ttccaccgcctgacgtttgcccaaggccacctcacccttaccctgtgcttcatggctctg
ccaaccgccctctccgaactcgtcgcccgcgtcgatgtctggtattcgcctgaacacctc
atccctgcgctggaaccctggtatgccttgccagcaccttcccccgtgacacacgccaac
gtcatcggcggcggcatcgcaggttgccaaatcgcgcacgcgctggcaaaacgcggctgg
gaagtcaccttgtacgaacgccacacccgccttgcgatggaagcatccggcaaccgtgcg
ggcgtgctaaccccgaaaatgacagcagaagctggttggggcgaaaccttttaccgccaa
gcgttcttgtttgccgtgcagcaaattcgccaactgcaagcagcggggcaggcgatcgac
tgggcgcaatgcggcgcgttgcaactggcacacgaaccgcgtgaagcggcgcgtcagcaa
gcgcttcgggtgcgtgagttgcctgccgatttcatccagattctcgatcaggcagaggct
tccgccgtagcggggattccgttaccgagtggcgcgagttatttcccgcaagcaggttgg
ctgaatcctgccagtttgtgtgcggcgttggtggcgcaccccaatattgaagtgcgcacg
ctgacagatgcgagcgttttgccgatggatggtgtgacgattattgccagtggacgcgag
gcggatcggtttgccgcgagtcagtttctgccctttatgccggtattggggcaaaccagc
gcggcgaccgcttcggcgtttagccagcaactgaagacaacgctaggacacgaaggctat
ttaaccccagcgctggcggggcaacacattttcggggcaacgtttgtgcgtaataggcgc
gaacctaggctggatgccgccgccgataccgtgaatcaccagcaattggcgcaatacctg
cccgcttttgccgcctcacttggcacggtgcaaaccagccacgcggcgattcgcatgaca
acgccggatcgctatccggtggtgggggcgctgccggatgtcgcatttttccagcaagcc
tacgccgaattgcggcatggtcgcgcaaaccagccgtttccactggcgcattatcagccg
agtgtgtggatagcggcgggttttggttcgcgtgggcttaccaccagcggtttgtgtgcg
gagttgctggcggctttgctgacgggggaaccgttgccgatgcaggcgacgttgtatcgc
catttgcatccggcccggtttctgattcgtcagcttaagcgcggttag
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