Thiothrix subterranea: HMY34_18890
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Entry
HMY34_18890 CDS
T07831
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
tsb
Thiothrix subterranea
Pathway
tsb00860
Porphyrin metabolism
tsb01100
Metabolic pathways
tsb01110
Biosynthesis of secondary metabolites
tsb01120
Microbial metabolism in diverse environments
tsb01240
Biosynthesis of cofactors
Module
tsb_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
tsb_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
tsb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HMY34_18890 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsb04147
]
HMY34_18890 (hemB)
Enzymes [BR:
tsb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HMY34_18890 (hemB)
Exosome [BR:
tsb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMY34_18890 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
Motif
Other DBs
NCBI-ProteinID:
QQZ30651
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All DBs
Position
3837767..3838774
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AA seq
335 aa
AA seq
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MAIYPGMYPYTRMRRMRRDDFSRRLMRENVLTANDLIWPVFVMDGENQREAIASMPGVER
ISIDLLVKEAEAAFKLGIPAMAIFPVTPQSAKTDKAEEAWNPDGLAQRAVRAIKAAVPEL
GVITDVALDPFTSHGQDGLMDENGYILNDETVAALTKQALSHAEAGADVVAPSDMMDGRI
GEIRDVLEQHGHLNTRILAYSAKYASSFYGPFRDAVGSAANLKGGNKYSYQMDPANSDEA
LWEVALDLQEGADMVMIKPGMPYLDIVRRIKEEFKAPTYVYQVSGEYAMFKAAGMNGWIN
EKACVMEALLGMKRAGADGILTYYAKQVAEWLKHD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctatttaccccggaatgtacccttacacccgtatgcgcaggatgcgccgtgatgat
ttttcccgccgtttaatgcgcgaaaacgtgctgactgccaatgatttgatttggccagtg
tttgtgatggatggcgagaatcagcgcgaagccattgcctccatgcccggtgtggagcgg
attagcattgatctgttggtgaaagaagcggaagcagcgttcaaactgggcattccggca
atggcgattttccctgtgaccccgcaatccgcgaaaaccgataaggcggaagaggcgtgg
aatcccgatggtttagcgcaacgcgctgtgcgggcgattaaagccgctgtgccggaattg
ggtgtgattaccgatgtggcgcttgacccgttcacctcgcacgggcaggacggcttgatg
gatgaaaacggctatatcctcaacgatgaaaccgtggcagctttgaccaagcaggcgctt
tcccacgccgaagcgggcgcggatgtggtcgcaccgtcggatatgatggacgggcgtatc
ggtgaaattcgtgacgtattggaacagcatgggcatttgaacacgcgcattctggcgtac
tccgcgaaatacgcttcaagcttttatggcccattccgtgatgcggttggttcggctgcg
aatttgaagggcggcaataaatacagctaccagatggatcctgctaattccgacgaagcc
ttgtgggaagtcgcgctcgacctgcaagaaggcgcggatatggtgatgatcaagccggga
atgccctacctcgacatcgtgcgccgtatcaaagaagagttcaaagcgcctacctacgtc
taccaagtcagcggcgaatacgcgatgttcaaagcagcggggatgaatggttggatcaac
gaaaaggcgtgcgtgatggaagccttgctggggatgaagcgtgcgggggcggatggtatt
ttgacgtattatgccaagcaggtggcggagtggttgaagcatgactga
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