Thiosulfatimonas sediminis: THMIRHAS_02340
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Entry
THMIRHAS_02340 CDS
T06859
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tse
Thiosulfatimonas sediminis
Brite
KEGG Orthology (KO) [BR:
tse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tse03016
]
THMIRHAS_02340 (trmA)
Enzymes [BR:
tse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
THMIRHAS_02340 (trmA)
Transfer RNA biogenesis [BR:
tse03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
THMIRHAS_02340 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_4
Methyltransf_11
Cons_hypoth95
PrmA
Methyltransf_12
DREV
Motif
Other DBs
NCBI-ProteinID:
BBP44861
UniProt:
A0A6F8PRV8
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All DBs
Position
261032..262114
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AA seq
360 aa
AA seq
DB search
MLCQVFPENYSSQLAEKVTRLQALLPTAVNLQVFASPTENYRARAEFRIWHEDDDAYYIM
FDQATKQKIRIDACPMAIASIAELMPRLMEAIRADAALRFKLFEIDFLATLSGEMLVTLI
YRRQIVDDEAWLAAANRLREKLPITHIIGRARKQKILLDADFVTETLNVDGKTFHYQQIE
NSFTQPNPYVAQQMLHWARHVSGQNAGDLIELYCGNGNFSIALADCYRRVLATEISKTSV
ASAQINIAHNGIDNLQIIKMAAEEVAEALSGRDFTRLKNIDLPSYQFSTIFVDPPRSGLD
DVTRKMVCDYERIIYISCHPETLARDLEVLTVTHDIQHTALFDQFPYTHHIESGVFLTRK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccaagtttttcctgaaaattactctagccaactggctgagaaggttacgcga
ttgcaggctttgttgccgaccgcggtgaacctgcaagtctttgcctctccaactgaaaac
tatcgtgcacgtgctgaatttcgcatttggcatgaagacgatgacgcctattacattatg
tttgatcaggccactaagcaaaaaattcgtattgatgcgtgtccgatggcgattgcctcg
attgcggaattaatgccgcgtttaatggaagcgattcgtgccgatgcggctttgcgtttt
aagctttttgaaatcgactttttggcaactttgtcaggagaaatgctggtgaccttaatt
tatcgtcggcaaattgttgacgatgaggcatggttggcagcggcaaatcgtttacgcgaa
aagctgccgattacccacatcatcggacgggcgcgcaaacagaaaattctgctggatgcc
gattttgtcaccgaaaccctgaatgtcgatggtaagacgtttcattatcaacaaatcgaa
aacagttttacccagcccaatccttatgtggcgcagcagatgttgcattgggcacgccac
gtttccgggcagaatgccggtgatttaatcgagttgtattgcggtaacggcaatttttcg
attgcgttggcggactgctatcgtagggtattggcgaccgaaatctcgaaaacgtcggtg
gcctcggcgcaaatcaatattgcgcataatggcatcgacaatttgcagattatcaaaatg
gcggccgaagaagtggccgaggcgttaagcgggcgcgattttacgcgcttgaagaatatc
gacttgccgtcctaccagttcagtacgatttttgtcgatccgccgcgttccggtctggac
gatgtcacccgcaaaatggtctgtgattacgagcggattatttatatttcctgtcatcca
gaaaccttggcgcgcgatttggaagtgctgactgtaacccatgatattcaacacaccgcg
ctgtttgaccagtttccttatacccatcacattgaaagcggtgtgtttttaacccgaaaa
taa
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