Thermococcus sibiricus: TSIB_0388
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Entry
TSIB_0388 CDS
T00928
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSIB_0388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsi03021
]
TSIB_0388
Enzymes [BR:
tsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSIB_0388
Transcription machinery [BR:
tsi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TSIB_0388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
NOB1_Zn_bind
RUBY_RBDX
DUF5816
Auto_anti-p27
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ACS89454
UniProt:
C6A1F9
LinkDB
All DBs
Position
371700..375056
Genome browser
AA seq
1118 aa
AA seq
DB search
MRGPTIVEVTPDDLWHIMKAYWDEKGLVRQHLDSYNAFIEHGMQEVISEFEGVKPDIPDF
EVKFGRVRLGEPEFQEAHGQRKPLYPIDARIRNLTYSAPVFLGMIPVVKGIEQEPVEVRI
GELPVMLKSKICRLYNLSDEELIAHGEDPKDPGGYFIINGSERVIVSIEDLAPNRTLVEI
DERQNRYIAKCFSYRHGYRALITVERRKDGLLYVSIPNVPGVLKFVHIMRALGLESDKEI
VDAVGNNPEVQQVLFDNLEDASDVQTQEEALDYIGKRAMPGQPKEYRLRRAHSIIDNNLL
PHMGVSPEDRIRKAYYLGMMALKVTELSLGLREEDDKDHYASKRLKLAGDLLKDLFRVAF
GQLVKDMQYQLTKTYQRKGEKYTFQDIQRFVRNSVRPDVLTERIEHALATGAWPGGRTGV
SQLLDRTNYMSTLSHLRRVTSPLSREQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
SLMSQITTAIPEEEVFAYLESLGIVHIEERRPEPDDWRVYLNGVLVGTYKDGVELINKIK
TDRREGRISEVINVAYYEDVREIYINSDEGRVRRPLIIVENGVPKLTKDHVEAIKKGTLK
WSDLIRIGVIEYLDAEEEENAYVATWPWEVTEEHTHLEIMPATILGLPASLVPYPEHNAA
PRNTYGAGMAKQSLGLGWANFRIRVDTRGHLMHYPQVPLVNSRIMEAVGFEQRPAGQNFI
VAVLSYSGYNMEDAVIMNKASIERGLARSTFFRTYEAEEKKYMGGQTDKFEIPDPTVRGF
LGEKYYRNLDEDGIAFPESKVQGKDVLVARTSPPRFLEEQTSLGAGILQGRRETSITMRP
GEEGIIDKIIITETGDGTKLVKVTVRDLRIPEFGDKFASRHGQKGVIGLIVPQEDMPWTE
NGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRIDGTAFIGEPEEKLRKELEELG
FKHSGREVMYDGITGRKFEADIFVGVIYYQRLHHMVADKLHARSRGPVQVLTKQPTEGRA
REGGLRFGEMERDVLIGHGASMLLVERLLEESDKTEAWICESCGHLAVEDKRRDKIYCPV
CGEEENISKVEMSYAFKLLLDEIKAMGIRPSLKLKERV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtcctactattgttgaggttactccggatgatctttggcacattatgaaggct
tactgggatgaaaaagggcttgtaagacagcacctcgactcctacaatgcctttattgag
catggaatgcaagaagttattagcgaatttgaaggagtaaaaccagatatacctgatttt
gaagtcaagtttggaagagttagacttggagaaccagaatttcaagaagctcatggacaa
agaaagcctttatatcccatagatgctaggattaggaatttaacttattctgcaccggtc
ttcttgggaatgataccagtagtgaaggggattgaacaagagccagttgaggtaagaatt
ggtgaattgccggtaatgctgaaatccaaaatctgtcgtctttacaacttaagtgatgaa
gaacttatagcacatggagaggatcctaaagatccaggaggatatttcattattaacggt
tctgaaagagttattgtgtctattgaagatttagctccaaacagaacgcttgttgagatc
gacgagagacaaaatagatacatagcaaaatgtttttcatacagacatggttatagagct
ttaataacagtggagaggagaaaagacggtttactttatgtttcaattccgaatgtacca
ggtgttcttaaatttgtacacattatgagggctcttggtctggagagtgataaggaaata
gttgatgctgtgggtaacaatcctgaggttcaacaggttctctttgacaatttagaggat
gcaagtgatgttcaaactcaagaggaggctttagattatattggaaagagagcaatgcct
gggcagcccaaagaatataggcttagaagggctcactcaataattgataacaatcttctc
ccgcacatgggggtaagtccagaggacaggataaggaaagcatattaccttggaatgatg
gcacttaaagtaactgaactttctcttggactgagagaggaggatgataaagatcattat
gctagtaagaggcttaaacttgccggagatctcttgaaggacctttttagagttgcattc
ggccagcttgtaaaggacatgcaatatcaactaactaaaacctaccaaagaaagggtgag
aagtatactttccaagatatacagaggtttgtgagaaactctgtaaggcctgatgtacta
actgaaagaatcgaacatgctctcgccacgggggcttggccgggaggaagaactggtgtt
agccagttgcttgatagaactaattacatgtctacgctttcccacttgagaagggtcact
tctccactaagcagagagcaacctcatttcgaggcaagagatctgcacggtactcattgg
ggaagaatatgtccaactgaaaccccagaaggacctaactgtggactggttaagaacctc
tcgctaatgtctcaaattactactgctattccagaagaggaagtttttgcatatttggaa
agtcttgggatcgtgcacattgaggaaagaagaccagaacccgatgattggagggtttat
cttaatggagttcttgttgggacatataaagatggcgtagagttaattaataaaataaaa
accgataggagagaagggagaataagtgaggttataaatgtcgcgtactatgaggatgtt
agagagatttacatcaacagtgatgagggtagagtcaggagaccactaatcatagttgaa
aatggtgttccaaaattaaccaaagatcatgtagaggcaataaagaaagggacacttaag
tggagtgacttgataagaataggtgtcattgagtacctcgatgctgaggaagaagagaac
gcttatgtggctacatggccctgggaagttactgaagaacacacacatttggagataatg
cctgccaccattttaggattaccggcgtcactggtcccatatccagaacataatgctgct
ccaagaaatacttatggagcaggtatggctaagcaaagccttggccttggttgggccaac
tttaggataagagtagacactagagggcatttgatgcactatcctcaagtcccacttgtt
aactccaggatcatggaagcggtaggatttgaacaaagacctgctggtcagaattttatt
gtcgcagtcttgagttatagtggatataacatggaagatgccgttataatgaataaggcc
tcaattgaaagaggattggcaaggtcaacattctttagaacttatgaagctgaagaaaag
aagtatatgggaggacaaacagataagtttgaaataccagatcctactgttagaggattt
ttgggtgagaaatattatagaaaccttgatgaagatggaatagcatttccagaatcaaaa
gttcaaggaaaagatgtgttagtagcaagaacctctccgcctaggttcctcgaggagcaa
accagtttaggtgctggtattttgcaaggtagaagagagacgagcatcactatgaggccc
ggtgaagaaggtattatcgacaagattattatcacagaaacaggggatggtacaaagctt
gttaaggtaacagttagggatcttagaattccagaatttggggataagtttgcctcaaga
catggacagaagggcgttattggtcttatagttcctcaggaagacatgccctggacagaa
aacggaatagtaccggatcttatagttaaccctcatggtataccttcacgtatgactgtt
ggacagctcattgaggctataggtggtaaagtggcatcacttaagggaagaagaatagat
ggcactgcattcattggagagccagaagagaagcttagaaaggaacttgaagagctcggg
tttaagcatagtggaagggaagtaatgtatgatggaatcacaggaaggaaatttgaggca
gatatcttcgtgggtgttatttattatcagagactccaccacatggtagctgataagctc
catgcacgttcaagagggcctgtgcaagttctcacaaagcagccaactgaaggtagagct
agggagggaggtctaagattcggtgaaatggagcgtgacgtattaataggacatggtgcc
tcaatgttattagttgaaagattgctagaagagagcgataagacagaagcatggatatgt
gagagttgcggtcatttagcagtcgaagataagcgtagagacaaaatttattgtccagta
tgtggagaagaggagaatataagcaaagtagaaatgagttatgcattcaagttattactg
gatgagataaaggccatgggtattagaccatcattaaaacttaaggagagggtgtga
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integrated database retrieval system
