Terrihabitans soli: IZ6_16950
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Entry
IZ6_16950 CDS
T07468
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tso
Terrihabitans soli
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tso03009
]
IZ6_16950 (rimO)
Enzymes [BR:
tso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IZ6_16950 (rimO)
Ribosome biogenesis [BR:
tso03009
]
Prokaryotic type
ribosomal protein modification factors
IZ6_16950 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCJ90960
UniProt:
A0A6S6QVE2
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Position
complement(1639169..1640485)
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AA seq
438 aa
AA seq
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MDDRPAARVGLVSLGCPKALVDSERIITQLRAEGYELSKTYAGADVVIVNTCGFLDSAKA
ESLQAIGEAMAENGKVVVTGCMGAQPELIRDKFPDVLAITGPQAYESVVGAVHQAVPPRH
DPYMDLVPPQGLRLTPRHYAYLKISEGCNNRCSFCIIPQLRGDLVSRPAGDVLREAEKLV
KAGVKELLVISQDTSAYGVDVKYAESRWQDREVRTKFLDLCRELGTLGAWTRLHYVYPYP
HVDEAIPLMAEGKILPYLDIPLQHASPNVLRAMKRPAHQEKTLERIRRWREICPDITVRS
TFITGFPGETDADFEMMLDWLDEAQLDRVGCFPYEPVSGAPANDLAAPVPEEIKLERHRR
FMEKQEEISAQKLEAKIGKTLDVIIDEADDGGAQGRTKGDAPEIDGLVHIRTRKKLASGD
IVSVKIEDADEHDLFGVA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagacccgccgcgcgtgtggggctcgtcagtctcggctgccccaaggcactg
gtcgacagcgagcgcatcatcacccagctcagggccgaaggctatgagctgtcgaagacc
tatgccggtgccgatgtcgtcatcgtcaacacctgcggtttcctcgattccgccaaagcc
gaaagccttcaggccatcggcgaggccatggccgaaaacggcaaggtcgtcgtcaccggc
tgcatgggcgcccagcccgaactgatccgcgacaagtttccggatgtgctcgcgatcacc
ggcccgcaggcctatgaaagcgttgtcggcgcggtgcatcaggcggtgccgcccaggcac
gatccctatatggatcttgtgccgccgcagggcctgcgcctcacgccgcgccattacgcc
tatctgaagatttccgaaggctgcaacaatcgctgctccttctgcatcatcccgcagctg
cgcggcgatctcgtctcgcggccggcgggagatgttttacgtgaggcggagaagctggtt
aaggccggcgtcaaggaactgcttgtcatttcgcaggataccagcgcctacggcgtcgat
gtgaaatatgcggaaagccgctggcaggatcgcgaagttcgtacgaagtttttagatctt
tgccgcgaactcggcacgctcggcgcctggacgcgcctgcattatgtctacccctacccg
catgtcgacgaggccattccgctgatggcggagggcaagatactgccttatctcgacatc
ccgctgcagcatgcgagcccgaacgtgctgcgcgccatgaagcgcccggcgcatcaggaa
aagacgctggagcgcatccgccgctggcgcgagatctgccccgacatcaccgtgcgctcg
accttcatcaccggcttccccggcgagaccgatgccgattttgagatgatgctcgactgg
ctggatgaggcgcagctcgatcgtgtcggctgcttcccctatgagcccgtctccggcgcg
ccggcaaacgatcttgccgcgccggtgcccgaagagatcaaactcgagcgccaccgccgc
tttatggaaaagcaggaagagatctcggcgcaaaagctcgaagccaagatcggcaagacg
ctcgatgtcatcatcgatgaagcggacgacggcggtgcgcagggccgcaccaaaggcgat
gcgccagagatcgacggtctcgtgcatatccgcacgagaaagaagctcgcctccggcgat
atcgtcagcgtcaagatcgaagacgccgacgagcacgatctgttcggcgtcgcctga
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