Trichinella spiralis: Tsp_00897
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Entry
Tsp_00897 CDS
T01609
Name
(RefSeq) serine/threonine- protein phosphatase regulatory subunit A alpha
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tsp
Trichinella spiralis
Pathway
tsp03015
mRNA surveillance pathway
tsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tsp_00897
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
Tsp_00897
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_00897
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_00897
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00897
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
Tsp_00897
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
Tsp_00897
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
Tsp_00897
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
CLASP_N
Adaptin_N
Htt_N-HEAT_1
SCD
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-GeneID:
10904650
NCBI-ProteinID:
XP_003376723
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MTAAMDTGISPSASKDSDSLYPIAILIDELRNEDVQLRLNSIRKLSTIALALGPERTRTE
LIPFLTDTIYDEDEVLLALGEQLGNFTHLVGGPEYVSCLLYHFIIEIQSPLESLATVEET
VVREKAVESLRTLADKHSVHDLEEKFVPVVRHLAAGERSDWFTARTSACGLFSVVYPRVS
PAVKTELRMLFRNLCKDDTPMVRRAAASKFGEFAKVVELDNFKQDLMTAFVELANDDHDS
VRLLLVEGCVTVAELLRPENCDPLRPVIIRLAEDKSWRVRYMVADKFTDIQKAVGPEAMC
TELSNAFIALLKDVEAEVRSAAASRVIEFCKNLPEASRENLIFNQVLPCVKDLVNDVNQH
VKTSLASVIMGMAPLLGREKTVEHLLPMYLMLLKDETAEINEVIGVNQLANSLLPAIVDL
AEDVKWRVRLAIIEYMPLLARQLAQQFFDEKLLEYCINWLSDHGEIYAIREAATNNLKEL
VSKFGVQWAERAVFPKVLALASQSNYLQRLTCLNCITVLAPVCGSEATAKHLLPTVLKLA
TDPIANVRFNVAKTLKSIAPIFDPAAVQSEIKPTILKLLEDGDDDVRFFAEEAKNIYLLT
SVKVKKHPRVCLVKCSIQKITSEESDNFVEQQSAMDNNGN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgctatggatactggtatttcaccgagtgcttctaaagatagcgactcattg
tatcctatagcaattttaattgacgaacttcgaaatgaggatgttcaactacgtctgaat
agtattcgcaagttatcgacgatcgcacttgcgcttggtcctgaacgaactcgaactgag
ttaattccatttttgacggatactatttatgacgaagatgaggtacttttggcattgggt
gaacagctaggaaatttcactcatttagtcggtgggccggaatacgtcagttgtttgctg
tatcattttattattgaaattcagagcccgttggaaagcttagcgacagtcgaagagacc
gttgttcgggagaaagcagtcgaatcattgagaactttagctgacaaacattcggttcat
gatttagaagaaaagttcgttcctgtggttcgtcatttagcggcaggtgagcgaagtgat
tggtttactgcccgaacatcggcatgcgggttgttcagtgtcgtttatccaagagtttcg
cctgccgtaaaaaccgagttacgcatgctgtttcgtaatctttgcaaagatgacacccca
atggtacgccgtgcggctgcttcaaagtttggagaatttgctaaagttgtggaacttgac
aatttcaagcaagatttgatgaccgcatttgttgaactcgccaatgatgatcacgattct
gtgcgtttgttgctggtcgaaggatgcgtcacggttgctgaattgttacgtccagaaaat
tgtgaccctcttcgaccagttatcattcgacttgctgaagacaaatcgtggcgtgttcga
tacatggtagccgataaatttactgatatacagaaagctgttggtccggaagcgatgtgc
actgaattgtcgaacgcatttattgcgctgctcaaggatgttgaagctgaagttcgatcc
gctgctgcttcgcgagtgatagaattttgtaaaaatctgcctgaagcaagtcgcgaaaat
ttaattttcaatcaggttttgccttgtgtgaaagatttggtgaacgacgtaaatcagcat
gttaaaacttctttggcatcggttatcatgggtatggcgcccttgcttggacgagaaaaa
acagttgaacatcttcttccaatgtacttaatgctgttgaaagatgaaactgcagagatc
aatgaagtgattggagttaatcaattggcaaacagtttgttaccagcgattgttgatctt
gcggaagatgtgaaatggcgtgttcgtttggccatcattgaatacatgcctttgctggcg
agacagttggctcagcagttttttgatgagaaattattggaatattgtattaactggctt
tcggatcatggtgagatctatgccatacgcgaggcggcaacgaacaatttgaaagaactt
gtcagcaagtttggagttcagtgggctgagcgagctgtttttcccaaagtattggctctt
gcttctcagtcgaattatttgcaacgactcacctgcctgaattgcatcactgtactagct
ccagtctgtggttcggaagcaactgctaagcatttgctgccaactgttttgaagttagcc
accgatcctattgcgaatgtccgtttcaacgttgcgaaaactctgaaaagcattgcgcca
attttcgatccagcggcggtgcagagtgaaattaaaccaactatactgaaattattggaa
gatggcgatgatgacgtgcgtttttttgcggaggaggcaaagaatatttacttattgacg
agcgtgaaggttaaaaagcatccacgtgtatgcttagtgaaatgctctatccaaaaaatt
acatcagaggagtcggataactttgttgagcaacagtcagcaatggataataatggcaac
taa
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