Trichinella spiralis: Tsp_08341
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Entry
Tsp_08341 CDS
T01609
Name
(RefSeq) glutaminyl-tRNA synthetase
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00970
Aminoacyl-tRNA biosynthesis
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_08341
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_08341
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_08341
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
Tsp_08341
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Tsp_08341
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Tsp_08341
Prokaryotic type
Other AARSs
Tsp_08341
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA_synt_1c_R2
tRNA-synt_1c_C
Vps16_C
Herpes_U44
Motif
Other DBs
NCBI-GeneID:
10904069
NCBI-ProteinID:
XP_003375347
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MKYWPHTVHFIANCVCICLRSAIQYLVTISFMSGVSDDVDDEFWNDSNVSSFCFDDFPSD
TAKIIEEIGAELNKLDLNSTDDEELGLFGGDHLTSSFNDEMSSVSNSQTPSDLRSISSET
TEQRTTPLSVQATQSDSDDYKRLQAECSRLRSKWTELQCRLKQEKYFAPDFEETIGRLAT
GEIYIFQYYRRLSDKKQLLKTAIDFGDGDAICCVVLFLERTLSPVVFRQLLLEFPPAVSH
YIFYLKQLSMNDKLSELLLSLGLVEQLAAVEVSRICSEKNAESKIALLRKALAGGVFADP
SLNEERMFLNSYADLLEHQLPIDAADNSARVEGGLKNEKSVVDSSVLETLMYCCRLHYEL
PSNSLASPLSIRNKFALTEQQFDWIAIKALAERQQWAEIQKLLLRKGLFGKQKLKLPISC
EQLLNVLYSNGATASVSSKHSSNILIGLKDRLELLKYMATLSPSSVELSTAETARMAFAD
NNQLLSALGLSGEKIKETLRNETLTASLSNMANQVKRLCSFQVMQMLTCVVVRVCSFAFT
SAALQFLLSHAASDFDKAEFEQACGIGVKVTEEQIEDTVTSVIKANEEKLQLMRYKFPIS
SLIAEVRKVLPWADGSKLKKEIDMQMLILLGPKTLDDMQSGKKIPSKVMPKEKLKAKETA
KNEESEFEGAATIEELMKTKAHFHKPGENYKTEGYVVTPKTMDLLKRHLEITGGKVVTRF
PPEPNGILHIGHAKAINIDFGYAKVLYRKNEFYFFVVDNVAHGGICYLRYDDTNPEKEEE
RYFTAIREMVEWLGYTPYKVTHSSDYFDQLYEYALELIRRGHAYVCHQKAEEVKGINPTP
SPWRDRPIDESLKLFEDMKNGMFDEGAATLRMKITLEEGKVDPVAYRIKYVPHHRTGNKW
CIYPTYDYTHCLCDSIENITHSLCTKEFQSRRSSYYWLCNALDLYCPVQWEFARLNVHYA
VISKRKIIKLVQENIIRDWDDPRLFTLTALKRRGFPPQAINNFVAKMGLTTALTAVDPMM
LEACVRDVLNVTAPRHMAVLNPLKVRFANPVELPKMVEVPDFPNTLSDKSTGKHHVQFDS
TIFIEADDFKEHADDKHFKRFTSTQAVGLKYVGLVMILQEIKKVAYLTA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactggcctcatactgtacattttattgcaaattgtgtttgcatttgtttgaga
agtgcaatacagtatttagtgacaataagttttatgtctggtgtctccgatgatgtggat
gacgaattttggaacgattccaatgtgtcgtcgttttgtttcgatgattttccttccgat
actgcaaaaattattgaagaaattggggctgagttgaacaagttggatttgaattctaca
gatgacgaagaactaggcttatttggtggcgatcatctgaccagcagcttcaacgatgaa
atgtccagtgtttcaaattctcagactccgagtgatttacgctccatttcaagtgaaacc
actgaacagagaaccacaccgctttctgttcaagcaactcaatccgacagtgacgattac
aagcgtttgcaggcggaatgcagtcgtttgcgatccaaatggaccgaattacaatgtcgc
ttgaagcaggaaaaatattttgctcccgatttcgaggagacaattggccgtttggcaact
ggcgaaatttacatctttcaatattacagacggttgagtgacaaaaagcagttgttgaaa
actgcgatcgattttggcgacggtgatgcaatttgttgcgttgttctttttcttgaacgt
acactttcgccggttgtatttcggcagttgcttttggaattcccaccagccgtttcgcat
tatattttctatttgaaacagctctcaatgaatgataaattatctgaacttttgttatct
cttggtctggttgaacagttggctgctgttgaagtgagtcgtatttgttcagaaaagaat
gcagaatcgaaaattgcgcttttgagaaaagctctagccggcggtgtgtttgctgatcca
agcttgaatgaagagcgaatgtttttgaacagctatgctgatctgttggaacatcagttg
cctattgatgctgctgacaacagtgctcgtgttgagggcggtttgaaaaatgaaaagtct
gttgtggattcatctgtattggaaacgttgatgtattgttgccgtttgcattatgaactt
ccttcgaattctcttgctagtccattatcaattcggaataaatttgctcttactgaacag
cagtttgattggatcgcgatcaaagctctggcagaacgccaacaatgggctgaaatacaa
aaattgcttttgcgaaagggattgtttggtaaacagaagttgaaacttccaatatcttgt
gaacagcttttgaacgttttatacagcaatggcgctaccgcatctgtgagtagcaaacat
tcgtcgaatattctcatcggattgaaagaccgattagaattgttgaaatacatggccact
ttatctcctagcagtgttgaactgtctactgctgaaaccgctcgcatggctttcgcagat
aataatcagcttctgagtgcgcttggcttaagtggtgaaaaaattaaagaaacactgaga
aatgaaacgcttacggcatcactttccaacatggcaaatcaggtgaagcgactgtgcagc
tttcaggtaatgcaaatgttgacttgtgttgttgttcgagtttgcagttttgctttcacc
tcagccgcgttgcaatttcttctttcgcatgctgccagcgattttgataaagcagaattc
gagcaggcttgtggcattggtgtgaaagttactgaagaacaaattgaagatactgttaca
tccgttatcaaagcgaatgaagaaaagttacagttgatgcgttataaatttccaatttca
tcgttgattgctgaagtccgcaaagtattaccatgggctgatgggagcaagttgaagaaa
gaaattgatatgcaaatgttgatattattggggccgaaaacattggacgatatgcagagc
ggaaagaaaatcccttcaaaggtgatgccaaaagagaaattgaaagccaaagaaacagca
aaaaatgaagaaagtgagtttgaaggtgcagctactattgaagaattgatgaaaacaaaa
gcacatttccacaagccgggagagaactacaaaactgaaggatatgttgtaacaccaaag
actatggatcttttgaaaaggcatttggaaattacggggggaaaggtagtgacgagattt
ccacctgaaccaaacggtattttgcacattggtcacgcgaaagctataaacattgatttt
ggatatgctaaagtgctgtacaggaaaaacgaattttatttttttgttgttgataatgtg
gctcacggtgggatctgctatttgcgttatgatgacacaaacccggaaaaagaagaagaa
cggtatttcactgcaattcgagaaatggtagaatggttaggatatacaccttacaaagtg
acgcattcgtcagattattttgatcaactgtacgaatatgctttggaattgataaggcgt
ggccatgcctacgtttgccatcagaaagcggaagaagtgaaaggtattaatccgacacct
tctccgtggcgtgatcgacccattgacgagtctttgaagttgttcgaagatatgaaaaat
ggtatgttcgacgagggcgcagcaacccttcgaatgaaaataactttggaagaaggaaaa
gtcgacccagtggcgtatagaatcaaatacgttcctcatcacagaacgggcaataaatgg
tgtatttacccaacttatgattatactcattgtttgtgcgattcgattgaaaatataaca
cattctttgtgcacgaaagagtttcaatcgagacgatcctcttattattggttgtgcaac
gcattggatttgtattgtccagtgcaatgggaatttgctcgtctgaacgtccattacgcg
gtcatatctaaaaggaaaattatcaaattagttcaagaaaatattatacgcgattgggac
gatccgagactgtttacactcacagctctgaaacgacgtggttttcctccacaagcgata
aacaattttgtcgctaaaatgggtcttacgacagctttaactgcagttgatccgatgatg
ctcgaagcttgtgttcgagatgtgctaaacgtaaccgctccgagacatatggcagtgttg
aaccctttgaaagtaagatttgcaaaccctgttgaattgccaaaaatggtggaagtgcca
gactttcccaacactctgtcggataaatccacaggaaagcatcatgtccagtttgattct
acaatattcatcgaagctgatgattttaaagagcatgctgatgataaacattttaaacgc
tttacgagtactcaagcagttggtttaaagtatgttggtcttgtgatgattttgcaagaa
ataaaaaaggtagcttatcttactgcttga
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integrated database retrieval system
