Trichinella spiralis: Tsp_11760
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Entry
Tsp_11760 CDS
T01609
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tsp
Trichinella spiralis
Pathway
tsp03020
RNA polymerase
tsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tsp_11760
09124 Replication and repair
03420 Nucleotide excision repair
Tsp_11760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_11760
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_11760
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Tsp_11760
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Tsp_11760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
10897916
NCBI-ProteinID:
XP_003374172
LinkDB
All DBs
Position
Unknown
AA seq
213 aa
AA seq
DB search
MSSNVGNQYENSDSESDEWQDEKICKVEIDIIQLNDEVIKFSLANTRLSFANCLRRIFIA
ETPCLVHRLGLLPLTSDETVSRMRFARECQCSDHCSECAVQLTLEKQCRDESTHVVSTAD
LKSQDPRVIPLHQFKTDQKNTMHFRLADRNGKLSTKIIIAKLCRGQELNVVCLARKGIGK
EHAKWNPTASVAFEYDPDNALRHTTYPKPEEWY
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaacgttggcaaccagtatgagaactccgattcagaaagtgacgaatggcaa
gacgagaaaatatgcaaagtagagatagatattattcagctcaacgatgaagtgatcaaa
ttttcattagcaaataccagactgagctttgctaactgcttgcgtcgaattttcatagcc
gaaacaccatgccttgttcaccgtcttggcttgcttccacttacctcagatgagactgtc
agtcggatgcgttttgccagggaatgtcagtgcagtgatcactgcagcgaatgtgccgtg
caattgactttggaaaaacagtgccgtgatgaaagtacgcacgttgtcagcacggctgat
ttgaaatcccaagatccacgcgtgattccgcttcatcaattcaaaactgaccaaaagaat
acaatgcacttcaggcttgcggatcgcaacggaaagctgtcgacgaaaataattattgcc
aaactgtgccgaggtcaagaattgaacgtcgtctgtttggcccgtaaaggaattggcaaa
gagcatgccaagtggaacccgacggccagtgtcgcatttgagtacgatccggacaacgcg
ctcaggcacacaacatacccgaagcctgaagaatggtattaa
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