Telopea speciosissima (New South Wales waratah): 122644035
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Entry
122644035 CDS
T07910
Name
(RefSeq) cyclin-dependent kinase D-1-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03022
Basal transcription factors
tss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122644035
09124 Replication and repair
03420 Nucleotide excision repair
122644035
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tss01001
]
122644035
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tss03021
]
122644035
03019 Messenger RNA biogenesis [BR:
tss03019
]
122644035
03400 DNA repair and recombination proteins [BR:
tss03400
]
122644035
Enzymes [BR:
tss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
122644035
2.7.11.23 [RNA-polymerase]-subunit kinase
122644035
Protein kinases [BR:
tss01001
]
Serine/threonine kinases: CMGC group
CDK family
122644035
Transcription machinery [BR:
tss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122644035
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
122644035
DNA repair and recombination proteins [BR:
tss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122644035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
122644035
NCBI-ProteinID:
XP_043693565
LinkDB
All DBs
Position
10:4015225..4037432
Genome browser
AA seq
413 aa
AA seq
DB search
MSEVDRLLIKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKYKEGVNFTA
LREIKLLKELKDPNIIKLIDAFPHKGNLHLVFEFMESDLEAVIRDRNIVLSPADIKSYMQ
MTLKGLAHCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPDRKFTHQVFARWYR
APELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKASQWPD
MIYLPDYVEYQFVPAPPLHTLFPVASDDTLDLLSKMFTYDPKARISVQQALEHRYFSSIP
APTKPALLPWPARKGESKPSDYNPHDGPIVLSPPRKSRRVMVQREGLDGNTYQTDKGDHH
ANEATDGISGRSETMPMSIDFSVFGSRPPPRPTLNSADRTHLKRKLDLEFPTS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggttgataggctgcttattaagaaagttgcagatcgatacctgaagcgtgag
gttcttggtgaaggtacctatggtgttgtttacaaggccattgataccaagacagggcag
acagttgccattaagaaaatccggctggggaagtacaaggagggtgtaaattttactgct
cttagggagattaaactgcttaaagagctcaaggatcccaatataattaagttgatcgat
gctttccctcacaagggaaaccttcaccttgtgtttgagttcatggagagtgaccttgaa
gccgtcattcgagataggaatattgttctttctcctgctgacatcaagtcttacatgcag
atgacattaaaagggcttgcccattgccacaagaaatgggttctgcacagggatatgaaa
ccaaataacttacttataggtgctgacgggcagcttaagctagcagactttggtttggcg
cgtatatttggaagcccagaccgcaaattcacccaccaggtttttgctcgatggtatagg
gcacctgaattattgtttggcactaagcaatatgggtctggggtggatgtttgggctgca
gcttgtatatttgctgaacttctcctccgccgtccctttctacaggggtcaagtgatatt
gatcaattaggaaagatctttgcagcttttgggaccccaaaggcttcccagtggcctgac
atgatttaccttccagattatgtagaataccaatttgttcctgctcctccattgcacaca
ttgtttccagtggcaagtgacgatactctagatctattatcaaagatgttcacctatgac
ccaaaagcaagaatttctgttcagcaggcattggagcacaggtatttttcatctatacct
gcaccaacaaaaccagctctgcttccatggcctgcccgtaagggagaatctaagccttca
gattataatccacatgatggtccaattgtcttatctcccccgagaaaatcaaggagagtc
atggtccaacgtgaggggcttgatggaaatacatatcaaactgataaaggtgatcaccat
gcaaatgaagcaacagatgggatttcaggaaggagtgaaactatgccaatgtcgatagat
ttttctgtttttggatcaagacctcctcccagaccaacactgaacagtgctgatagaacg
catttaaagagaaaattagatcttgaatttcctacatcctga
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