Telopea speciosissima (New South Wales waratah): 122656647
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Entry
122656647 CDS
T07910
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00040
Pentose and glucuronate interconversions
tss01100
Metabolic pathways
Module
tss_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122656647
Enzymes [BR:
tss01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122656647
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
NosD
Motif
Other DBs
NCBI-GeneID:
122656647
NCBI-ProteinID:
XP_043707227
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Position
1:9123678..9125550
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AA seq
384 aa
AA seq
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MNLCSSSGSRNPKVNLTAAPEATPEKPESEPTAAPGADPTPGNEPTAPEAAPTTPETASQ
GTVFDVTKYGAVGDGKTDNNKAFSAAWDAACKSTGPSTVLVPKGDFILPAITFSGPCSNN
ISPRVEIRGKIIASRARTSLELLSITGGSLSGISSTNSKGSHGIVGNTKDFIIQDIKLVA
PAESPNTDGFHIGNSTGITITNAEIGTGDDCISIGSGVTNISITNVQCGPGHGISLGSLG
KYPNEQEVSGLLVKNCTFTNTDNGVRIKTWPGCPENTVSDVRFEDIVVTNVSNPIIINQQ
YCDQKSCTSEPSRVKLTDIHFKNIKGTSFTKTAITLSCSEGVPCENVELVDIDLKHNLAD
GVATALCKNVKGVTSGIQNPSSCL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcagctcgagcggctcgcgaaatccgaaagtgaacctcacggcggctcca
gaagcaactccagagaaacccgaaagtgaacctacggcggctccaggagcagatcctacg
cctggaaatgaacctacggccccagaagcagctccgacaacgcctgaaacggcttcacaa
ggtacagtgttcgatgtcacaaagtatggagcagttggtgatggaaagacggataataat
aaggcattttctgctgcatgggatgctgcatgtaagtccacagggccatccaccgttttg
gtacccaaaggggacttcattcttcccgcaataactttctctggtccatgctccaacaac
atttctccacgtgttgagataaggggtaaaattatagcttcccgtgcacggacgagcttg
gaattgttgtcgattacaggtggatccttgagtggtataagttcgacaaatagtaaaggt
tcccatgggattgttgggaacactaaagacttcatcatccaagatatcaagctggttgcc
cctgcagaaagcccaaacacagatggtttccacattggcaactcaaccggtatcactatc
actaacgctgaaattggaacgggtgatgattgcatctccattggatcgggtgtcaccaac
atttccatcaccaatgtccaatgtggaccaggtcatggaatcagtttgggaagccttggg
aaatatccaaatgaacaagaggtgagcggtctgctggtgaagaactgtacctttactaac
accgataatggtgttcggatcaaaacatggccaggatgtccagaaaacacggtttctgat
gttagatttgaggatattgtcgtcacaaatgtgtcaaaccccatcatcatcaaccaacaa
tattgtgaccagaaaagctgcacatctgagccctcgcgtgtgaagctcactgacattcat
ttcaagaacatcaagggtacaagcttcaccaagactgcaattaccctctcatgcagtgaa
ggtgtgccatgtgagaacgtagagctcgttgatatcgacttgaagcataacttggccgat
ggcgtcgccactgcgctctgtaaaaatgtgaaaggggttacttctggcattcagaaccca
agttcatgcttatga
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