KEGG   Telopea speciosissima (New South Wales waratah): 122657535
Entry
122657535         CDS       T07910                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03020  RNA polymerase
tss03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122657535
  09124 Replication and repair
   03420 Nucleotide excision repair
    122657535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tss03021]
    122657535
   03400 DNA repair and recombination proteins [BR:tss03400]
    122657535
Transcription machinery [BR:tss03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     122657535
DNA repair and recombination proteins [BR:tss03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122657535
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zinc_ribbon_4
Other DBs
NCBI-GeneID: 122657535
NCBI-ProteinID: XP_043708199
LinkDB
Position
4:66851242..66856638
AA seq 114 aa
MSTMKFCRECNNILYPKEDKDQKILLYACRNCDHQEVADNNCVYRNEIHHSVGERTQVLQ
DVAADPTLPRTKSVRCTQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtactatgaaattttgtcgagaatgcaacaacattctctacccaaaggaagacaag
gatcagaagatcctcctttacgcttgtcgaaactgcgatcaccaggaggttgctgataac
aattgtgtgtatagaaatgagatacatcactctgttggtgagcgcactcaagtcttgcag
gatgtagctgctgatccaactctacctcgaactaaatctgttcgatgtactcagtgcaac
catggagaagctgtgttcttccaggcaactgctagaggagaggaaggaatgacactattt
tttgtttgctgcaaccctaattgtggccatcgttggagagattga

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