Telopea speciosissima (New South Wales waratah): 122657604
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Entry
122657604 CDS
T07910
Name
(RefSeq) ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss02010
ABC transporters
tss04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122657604
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122657604
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tss02000
]
122657604
Enzymes [BR:
tss01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
122657604
Transporters [BR:
tss02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
122657604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
Mg_chelatase
AAA_22
AAA_30
DUF1622
Motif
Other DBs
NCBI-GeneID:
122657604
NCBI-ProteinID:
XP_043708292
LinkDB
All DBs
Position
4:complement(23441372..23535813)
Genome browser
AA seq
1341 aa
AA seq
DB search
MPSLQLFQLTKNGRNLLSSRRRALALASSILVAGGTAAYMRSRLRSRSGNPGSSDHYSEP
AIDKEKSSQVDVNDTVVRKTRVKKRGLSSLKVLTAILLSRMGQRGTSDLLALVTIVALRT
ALSIRLAKVQGFLFRAAFLRRIPSFLHLILENIILCFLRSALSSTSKYITGTLSLRFRKI
LTDLIHAHYFENMAYYKLSNIDGRVTNPEQRIASDIPRFCSELSDLVQEDLTAVTDGLLY
TWRLCSYASPKYFFWILAYVTGVGIVTGNISPAFGKLMSKEQQLEGEYRQLHSRLRTHAE
SIAFYGGENREEFHIQQKFKTLVRHMKLVLHDHWWFGMVQDFLLKYLDKTVAVFLIIEPF
FSGNLRPDTSTLGRAEMLSNLRYHTSVITSLFQALGNLSISSRKLNRLSGYAERIHELMA
ISRELSAVHDKFSGQGNGSRSYFTEANYIEFANVKVVTPTNNVLVEDLTLRVESGTNLLI
TGPNGSGKSSLFRVLGGLWPLVSGYISKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYP
LTADEEIVPLTHSGIAELLKNVDLEYLLGRYPPEREINWGDELSLGEQQRLGMARLFYHK
PKFAILDECTSAVTTDMEERFCAKVRAIGTSCITISHRPALVTFHDMVLSLDGEGGWTVY
HKREDSPLPIEAGLEKTKSFETDRQSDAMAVQRAFATTREDTAFSNSKVQSYVVEVVARS
PTADHKESLPVVPQLQTTPRALPLRVAAMFKVLVPTLLDKQGTQLFAVALLVMSRTWISD
RIASLNGTSVKFVLEQDKAAFIRLTGVSVLQSAASSIVAPSLRYLKAKLALGWRIRLTQH
LLKNYLRKNTFYEVFHNSAKNIDADQRITHDVEKLTTALSGLVTGMVKPSVDILWFTWRM
KLLTGQRGVAILYAYMLLGLGCLRSATPDFGDLTSQEQQLEGTFRFMHERLRTHAESIAF
FGGGAREKAMIDSRFRMLLGHSKILLKKKWLYGILDDFITKQLPHNVTWGLSLLYALEHK
GDQALTSTQGDLAHALRFLASVVSQSFLAFGDILELHRKFLELSGGINRIFELDELLGAA
QSEVQLCDTPISLEDNDVAAEDIISFSEVDIITPTQKLLARKLTCDIVPGRSMLVTGPNG
SGKSSVFRVLHGLWPTASGRLTKPLQSIKEKESSRCGVFYIPQRPYTCLGSLRDQIIYPL
SHEEAKGIAVKMFGQGEKSEDGGYLLDPHLRSILENVRLIYLLEREGGWDATVNWEDVLS
LGEQQRLGMARLFFQRPRFGVLDECTNATSVDVEEHLYKLAQEMGITVITTSQRPALIPY
HSTELQLVDGEGKWELRSIKH
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcagttatttcagctaactaagaatggtcgaaatcttttgtcgtcaagg
aggagagccctggcattagccagtagtatcttagttgctggtggaacagcagcatacatg
cggtcacgattgcggagcagaagtggaaatcctggctcttctgatcattattctgaacct
gctattgataaagaaaaatcaagtcaggtcgatgtaaatgatactgttgtgaggaaaact
agggtaaagaaaagaggtctgagctctcttaaagttctaactgcaatcctactttctcga
atgggacaaaggggtacaagtgaccttctagctctagtgaccatagtggcattgcggact
gctttgagcattagattggcaaaagtgcaaggattcctatttcgtgctgcttttcttcga
cgaataccatcctttttacatctgatccttgaaaacattattttatgtttccttcgatca
gccttgtcttccacctcgaagtacataacaggaaccctaagtttacgcttcagaaaaata
ctgactgatcttattcatgctcattactttgagaatatggcatactacaaactatcaaat
attgatggtcgagtaaccaatcctgaacaacgaattgctagtgatataccgaggttctgt
tcagaattgagtgatctcgtacaggaggatctgacagcagttactgatggtttgctttat
acgtggcgtctgtgttcttatgcaagcccaaaatattttttctggatattggcttatgtt
actggtgtggggattgtcactggaaatatctctcctgcatttggaaaactgatgtcaaaa
gagcaacagttggaaggtgagtatcgacagcttcattcgcggttgaggactcatgcagag
agcatagcattttatggtggagagaatagagaggaatttcatatccaacagaaattcaag
actcttgttaggcacatgaagcttgtacttcatgaccattggtggtttggcatggttcaa
gacttcctgttgaagtatcttgataaaacagtagcagtttttcttatcattgagcccttt
ttctctggcaatctaaggcctgatacttcaactttaggacgagcagagatgcttagcaat
ctaagatatcatacaagtgtgataacatccttgtttcaggcccttggaaatctttctata
agttcaagaaagctaaatcgtctcagtggttatgctgaacgcattcatgaactaatggcc
atttcgagagaactgagcgctgttcatgataaattttctggtcaaggaaatggaagtagg
agttattttaccgaagctaactatattgagtttgctaatgtcaaggttgttacaccaaca
aataatgtccttgtggaggatttgactcttagagtagaatcaggaactaatcttttgatt
acaggtccaaatggtagtggaaaaagttctcttttccgtgttctaggagggctttggcca
ctagtatctggctacatttcaaaacctggggttggttctgatctcaataaggagattttc
tatgttccacaaagaccttatacagctgtaggaacacttcgggaccagttaatttatcct
cttacagcagatgaagagattgtaccacttacacatagtggaatcgctgagctgttgaaa
aatgttgatcttgagtacctattgggtcgttatccaccagagagggagataaactggggt
gatgagctctctcttggagaacaacaaaggctggggatggctagactcttctaccataaa
cctaagtttgctattctcgatgagtgcaccagtgccgtgacaactgatatggaggaacgg
ttctgtgccaaagttcgagcaataggaacatcatgtatcactatatcacatcgtcctgcc
cttgttacatttcatgacatggttttatccttggatggggaaggaggctggaccgtttat
cacaagagggaggattctccactgcctatagaagctgggctggagaaaacaaagtcattt
gaaacagaccgccaaagtgatgcaatggcagttcagcgagcttttgctaccactagggag
gacactgcattctcaaattccaaagtacaatcatatgttgtagaggtggtagcaaggtct
cctactgcagatcataaagagtcattgcctgttgttccgcaattgcaaacgactccaagg
gccttaccactaagagtagcagccatgtttaaagtactggtacccacactgcttgataaa
cagggcacacagctgtttgctgtagctttacttgtcatgtcaaggacatggatctcagat
cgtattgcttctttgaatgggactagtgtgaagtttgttttggagcaggataaagcagct
tttattcgtttgactggtgttagtgttcttcaaagtgctgcatcctctattgtagcgcct
tctttgagatacttgaaagcaaaactagcccttggatggagaattcgtttaactcaacat
ttgctcaaaaactacttgagaaagaacacattttacgaggtattccacaattcagctaaa
aatattgatgcagatcagaggataacacatgatgtggaaaagctgactactgccttgtca
ggacttgtcaccggaatggttaagccgtctgtggacattctttggttcacctggaggatg
aagctgttaactggccaaaggggagttgcgatactatatgcatatatgttactgggtctt
ggttgtctaaggagtgctacacctgactttggtgatctaactagccaagagcaacaactt
gagggaaccttcagattcatgcacgaaaggctccgtactcatgctgaatccattgccttc
tttgggggcggtgccagagaaaaagctatgattgattcaagattcagaatgctgcttggt
cactctaaaattcttctaaagaagaaatggctgtacggtatactggatgattttatcacc
aagcaactcccacacaatgtgacttgggggttgagtttattatatgctctggagcacaag
ggtgatcaagcattgacttccacccaaggtgaccttgcacatgcattgcggttccttgca
tctgttgtatcacaaagcttcctagcttttggtgacattcttgagttgcatagaaaattt
cttgaactttctggtggcatcaataggatttttgagctggatgagcttcttggtgcagct
caaagcgaggttcagttgtgtgatactccaatttcacttgaggacaatgatgttgcagca
gaagatattatctcattctcagaggtggatattatcaccccaacgcagaagttgttggct
aggaagttgacatgtgacattgttccagggagaagcatgcttgttactggtcccaatggg
agcgggaagagttctgttttcagagttcttcatggcttatggccgactgcaagtggaaga
ctgactaaaccattacaaagtatcaaagaaaaggaaagctcaaggtgtggtgtcttctat
attcctcaacgaccatatacatgtttgggatccctaagggatcaaattatctaccctctc
tcgcatgaagaagcgaaaggcattgcagtcaagatgtttggacaaggtgaaaagtctgag
gatggtggatacttactggacccacatttgagatcgattcttgaaaatgttcgattgatc
taccttctggaaagggagggaggttgggatgctactgtgaactgggaagatgttctctct
cttggggagcagcaaagacttggcatggcccgcctattctttcaaagacctagatttggt
gttcttgatgaatgcaccaatgctacaagtgttgatgtcgaagagcacctgtataagctg
gcacaggagatgggcatcactgttattaccacctcacaacgaccagctctgataccgtat
cattccacggaactgcaattggttgatggtgagggtaaatgggagctacgatcaattaaa
cattag
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integrated database retrieval system
