Telopea speciosissima (New South Wales waratah): 122662409
Help
Entry
122662409 CDS
T07910
Name
(RefSeq) biotin--protein ligase 2-like isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss00780
Biotin metabolism
tss01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
122662409
Enzymes [BR:
tss01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
122662409
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
122662409
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
122662409
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
122662409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
122662409
NCBI-ProteinID:
XP_043713965
LinkDB
All DBs
Position
5:55239140..55287289
Genome browser
AA seq
359 aa
AA seq
DB search
MSSLFRFLVSISSKPIFPSQINKRSISVLAMENPSSSLLILCGKSPVEIEVAHSLKNNKN
LKLPDNTDLLLHLQSEMEEQTEEESFRIKYYMSSLSTDCFGKFLIWSPRLTSTHDIVSHN
FSELPVGTVCVADVQFKGRGRSKNVWESPKGCLMFSFTLQMEDGRVVPLLQYVVTLAMTE
ALNAICDANGLPHLGVKIKWPNDLYLNGMKVGGVLCTSTYRSKKFNVSTGIGLNVDNEEP
TICLNAALREISSNAYQLRREDILVEFFKKFENLFGIFLNEGFQALEELYYKSWLHSGQR
VVIQEKGDDQKVEDVVVTIQGLTTSGYLLGFGEDNQMYELHPDGNSFDFFKGLIRRKLD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttgttccgttttctggtttcaatctcatcaaaacccatttttccctcgcag
attaacaaacgctctatctcagtattggccatggagaatccatcatcttctctattaatt
ttatgcggaaaatcacctgtggagattgaagtcgctcattctttgaagaacaataagaat
ttgaagcttcccgataacacggaccttctgcttcatctgcaatcggagatggaagaacaa
actgaagaagagtcgtttcggataaaatactacatgagttccctttctactgattgtttc
ggtaaatttcttatttggtctccgcggttgacttcgacgcacgatatcgtttctcacaat
ttcagtgagcttcctgtcggtactgtctgtgttgctgatgttcagttcaaagggagaggt
cgttcgaagaatgtgtgggagtctccaaagggttgtcttatgttttcgtttaccttacag
atggaagatgggcgtgttgtgcctcttttacaatatgtggtgactcttgcaatgacggag
gcactgaatgccatttgtgatgcaaatggtttgccacatcttggtgttaaaataaagtgg
cccaatgatttgtacttaaatggcatgaaagttggaggcgtcttatgcacttcaacatat
agatcaaagaagttcaatgtcagtactggaataggtttaaatgtggataacgaggagccg
accatctgtttgaatgcagcacttcgagaaataagctctaatgcttaccaactaaggagg
gaggatattcttgtggaatttttcaagaaatttgagaatctttttggtattttcttgaat
gaaggatttcaagctctcgaggaactgtactataagtcatggttacatagtgggcaaaga
gttgtcatacaggaaaagggagatgatcaaaaagtggaagatgttgtggttactattcag
ggattaacaacctcgggatatttgttgggctttggagaagacaatcaaatgtatgagctt
catcctgatggtaatagctttgactttttcaaagggctgatcaggaggaaactggactga
DBGET
integrated database retrieval system
