Telopea speciosissima (New South Wales waratah): 122664223
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Entry
122664223 CDS
T07910
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tss
Telopea speciosissima (New South Wales waratah)
Pathway
tss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122664223
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tss01009
]
122664223
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tss03019
]
122664223
03036 Chromosome and associated proteins [BR:
tss03036
]
122664223
Protein phosphatases and associated proteins [BR:
tss01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122664223
Messenger RNA biogenesis [BR:
tss03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122664223
Chromosome and associated proteins [BR:
tss03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122664223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
Htt_N-HEAT_1
PDS5
CLASP_N
Cnd1
Adaptin_N
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
122664223
NCBI-ProteinID:
XP_043715885
LinkDB
All DBs
Position
6:complement(40668252..40682664)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMIDEPLYPIAILIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMGEELGVFIPYVGGVEYAHVLLPPLETLCTVEETCVRDKAVESLCRIGAQMKES
DLVDWFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPEMLKTELRQIYSQLCQDDMPMVR
RSAASNLGKFAATVEPAHLKTDIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLESQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPQLAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLEDKVYSIRDAAANNLKRLAEEFGPDWAMQHIVPQV
LDMISNPHYLYRMTILHAISLLAPVMGAEITCSKLLPVVVNASKDRVPNIKFNVAKVLQS
LIPIVDHSVVEQTIRPCLVELSEDPDVDVRFFASQALQASDQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatgatcgacgagccactatatccgattgctattttaatagacgaattgaaaaat
gaagatattcagcttcggttgaactctatccgtaggctttctacaatagctcgtgctttg
ggcgaggagagaacaaggaaggaattgattccttttcttagtgagaacaatgatgacgat
gatgaagtactgcttgcgatgggggaggagcttggggtgttcattccttacgttggtgga
gtggaatatgctcatgttttgttacccccattggagactctttgtactgttgaggaaacc
tgtgtgagggacaaagcagtagagtcgttgtgtaggattggtgctcagatgaaggagagt
gatcttgtcgattggtttatccctttggtcaagagactggcagctggtgagtggtttaca
gctcgggtttcctcatgtggattgtttcatattgcttatccaagtgcaccagagatgtta
aagacggaattacggcaaatatacagccagttatgtcaagatgacatgccaatggtgagg
aggtctgctgcatcaaacctcggaaagtttgctgctactgttgaaccagcccatctgaag
actgatataatgtcaatatttgaggatctgactcaggatgatcaagattctgttcgacta
ttggctgttgaggggtgtgcggcacttggaaagttgttggaatcccaggactgtgttgct
catatccttcctgtcatcgttaatttctcccaggataagtcttggcgtgttcgctacatg
gtagctaatcaattgtatgagctttgtgaagctgtggggcctgagcctaccaggtcggac
ctggttcctgcatatgtgcggttacttcgagataatgaggcagaagtgcgtattgcagct
gcaggaaaagtaactaagttctgccgaatattgaatccccaacttgcaattcagcatatc
cttccttgtgtgaaggaactctcatcagattcctctcagcatgttcgttctgctttggct
tcagtgataatgggaatggcacctgttttaggaaaggatgcaacaattgagcaacttctt
cctatttttctatcccttctgaaagatgaattccctgatgtccgacttaatattattagc
aagcttgatcaagtgaatcaggtgattggaattgatctgttgtcccaatcattgctacca
gccattgttgagcttgctgaggacagacattggagggttcggcttgcaattatagagtac
ataccattattagcaagtcagttgggtgttggattttttgatgataagcttggtgctctt
tgcatgcagtggttggaagataaggtatactcaatccgtgatgctgctgctaataacttg
aagcgtcttgcggaggaatttggtccagattgggcaatgcagcacatagttccccaggtt
ttagacatgattagcaacccacactatctttatcggatgaccattctacatgcaatttct
ctacttgcacctgtcatgggggcagaaatcacatgttcgaagttgctaccagtcgtcgtt
aatgcatcgaaagacagggtacccaacatcaaattcaatgtagcgaaggtgttgcagtcc
ctcattcctatagttgaccattctgtggtagagcagacaattcgcccatgtttggtggag
ctcagtgaggatccggatgtagatgtgagattttttgcaagccaagctcttcaggcaagt
gatcaagtcatgatgtctagctag
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integrated database retrieval system
