KEGG   Telopea speciosissima (New South Wales waratah): 122664373
Entry
122664373         CDS       T07910                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122664373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tss03021]
    122664373
Enzymes [BR:tss01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     122664373
Transcription machinery [BR:tss03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     122664373
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 122664373
NCBI-ProteinID: XP_043716099
LinkDB
Position
6:53057956..53094646
AA seq 1215 aa
MGEPEAKDDSGMSSEGEKFPDEMDMDFDQNGNVGTSKLPNVVNMDVDKSGEVGTSEAPEL
SEELLSKFRREASKLFFNEYGLIGHQIDSYNDFVERGIQKVFDSVGEITVEPGFDPSKKG
KGQGDWRYASVSFGEITFEKPMFWTAGSGTDDNKLLKLMPWHARLQHMSYSGRLKVKIKV
QVYTQKLMKSDKFKTGIEQFIEKDVQSEEERDVVVGRIPVMVRSKRCWLDGLDKNDCDFD
HGGYFLIKGAEKTFIAQEQICLRRLWVSSKPTWTVAYRSDLKRRRVYMKLIEPAKLEEAH
KGKILNVYFLVATMPIWILFFALGISSDKEIIDMIDLDINDATFRNILFSSILDADKECN
DFRKNGKALKYVDELFKKAKFPPKECTEDCFKDHLFPALTGLRQKALFLAYMVKCLLLSY
TGKRKCENRDDFRNKRLELSGDLLERELRVHIKHAERRMVKALQRDLYGDRNLHPIEHYL
DASIITNGLCRAFSTGAWSHPFKNERMSGVVANLRRTNPLQMMVDLRKTRQHVGYTGRVG
DARFPHPSHWGRLCFLSTPDGENCGLVKNFAVTGLVSTYLMEPLVNKLLDCGMEKLTDNQ
STAFLSRNAKVFLNGEWVGSCEDCLSFVADLRAKRRIKEIPPQVEIKCDRAQGEVRIFSD
PGRILRPLIIVEKLRKIKEFKGGAYTFQSLLDKGVIELLGVEEEEDCQTAWSIKDILGGD
KGKNYTHLELDLSFLMGLSCGLIPFANHNHARRILYESEKHSQQAIGFSTTNPYIRVDTL
SHQLYYPQVPLFRTMVSECLGTSQYPQGQGGFIPRPEFYNGQNAIVAVNVHLGYNQEDSL
VMNRASLERGMFRTEHIRSYKADVDNKELLATRRQKPKDRVEFAKIQSKIGRVDSLDDDG
FPHVGANLQTGDIVIGRCAESGADHSIKLKHTERGTVQKVILSANDDGKNFAVVSLRQVR
SPCLGDKFSSMHGQKGVVGLLESQEDFPFTLQGIVPDIVINPHAFPTRQTLGQLFESALG
KGIACDGSVRYATPFSTPSIDDVTNQLRRAGYERWGSEKFCNGRTGEMMQSLIFVGPTFY
QRLIHMAEDKVKFRNTGPVHPLTRQPVSDRKRFGGVKFGEMERDCLIAHGASANLHERLF
TLSDFSQMHICQKCTNIANVIQRSLPGGRKIRGPYCRFCESAENIVKVNVPYGAKLLCQE
LFSMGISVKFDTQVC
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgggggaacccgaggcgaaggatgactcagggatgagcagcgagggtgagaagttccca
gatgagatggacatggacttcgatcaaaatggtaatgttggtacttcgaagttaccaaat
gtggtgaatatggacgttgataaaagtggtgaagtgggtacctctgaagcgccggagttg
agtgaagagcttctcagcaagttccgcagagaggcttcgaagctctttttcaacgagtac
ggtctcattggtcaccagatagactcatacaatgacttcgttgagcgtgggattcagaaa
gtgtttgactctgtgggcgagatcacggtagagcctggtttcgatccctctaaaaagggt
aagggtcaaggagactggagatatgcatctgtatcgtttggcgaaattacttttgagaag
cctatgttttggaccgctggaagtgggactgatgacaataagctgctcaagttgatgcct
tggcatgctcgtctccaacacatgagctattcaggtcgcttgaaagtgaagatcaaagtt
caggtttatactcaaaagcttatgaaaagcgacaaattcaaaactggtatagagcaattt
attgaaaaggatgttcaaagtgaagaggaaagggatgtcgtggttggcaggatccctgtg
atggtgcggtccaaacgttgttggcttgatgggcttgataaaaatgattgcgattttgac
catggaggctattttttgatcaaaggtgcagagaagacgttcattgcacaagaacagatc
tgcctaaggagactctgggtttctagcaaaccgacctggacggttgcataccgttcagat
ttgaagaggagaagagtatatatgaagctcattgaaccagctaaactagaagaggctcat
aaagggaaaattttaaatgtgtatttcttggttgctacaatgcctatatggattttgttt
tttgccctcggtatttcatcagataaagaaattattgatatgattgatctggacattaat
gatgctaccttcagaaatatacttttctcttctatattggatgctgataaggaatgcaat
gattttcgtaaaaatggaaaggctctcaaatatgtggatgaacttttcaagaaagcaaaa
tttccacctaaggaatgcacagaggattgcttcaaagatcacttatttcctgctcttact
ggcttgagacaaaaggccctatttcttgcttatatggtcaagtgtcttttgctgtcttat
actggaaaaagaaaatgtgagaacagagatgattttagaaataaaagattagagttatct
ggtgatttgcttgaacgagagctgagagtgcacataaaacatgctgagaggcggatggtt
aaagctttgcagagagatctttatggagaccgtaacttgcacccgattgaacattatctt
gatgcgtcaattattactaatggcctttgtagggcattctcgactggtgcatggtcacat
cctttcaaaaatgagagaatgtctggtgtagtggcgaatcttagacgaacaaatccattg
caaatgatggtagatttgaggaagacacggcaacatgttgggtacactggacgggttgga
gatgctagatttccgcacccttcacactggggaaggttgtgctttctgtctaccccagat
ggggaaaactgtgggcttgtaaaaaattttgctgtcacaggacttgtcagcacatatttg
atggaacctctggtgaacaaattgttagattgtggtatggaaaagctgactgataatcaa
tctactgcctttttgagtagaaacgctaaagtttttctgaatggtgagtgggttggaagt
tgtgaagattgtctgtcatttgttgcggacctgagggccaagcgtcggattaaggaaatc
ccaccccaggtggagattaaatgtgaccgggcacagggtgaagtccgcatattttctgat
cctggtagaatattaagacctctcataattgttgagaaattaagaaagataaaagaattt
aaaggaggagcatacacctttcagtctcttctggataagggtgtaatagagcttctagga
gtagaagaagaagaagattgtcagactgcatggagcattaaggatatcttggggggtgac
aagggtaaaaactacacacatttggaactagacctttcattcttgatgggtttgagttgt
gggcttatcccttttgcaaatcacaatcatgctaggaggattctgtatgagtcagagaag
cactctcaacaagcaattgggttctcgacaactaacccttacatcagagtggatactcta
tctcatcagttgtactacccccaggttcctttattcaggaccatggtatctgaatgcctt
ggaacatcacagtatccccaaggtcagggaggatttattcccagacctgaattttataat
gggcagaatgctattgtggcagttaatgttcatctgggatataatcaagaggattccttg
gtcatgaatcgggcttctttagagcgtggaatgttccgtaccgaacatattcgaagttat
aaggctgatgttgacaacaaagagttgttggccaccagaagacaaaagccaaaggataga
gtggaatttgccaaaatacagagtaaaatagggcgtgttgatagccttgatgatgatggc
ttccctcatgtgggagcaaacttgcagactggtgacattgtcatcggtaggtgtgcagaa
tcaggggcagaccatagcatcaagctgaaacacacagaaagaggaacggttcagaaagtt
atcctgtcggcaaatgatgatggaaagaactttgcggttgtttcactgagacaggttaga
tcaccatgtctcggggacaagttttcaagcatgcatggtcagaagggtgttgttggactg
ttggagtctcaggaggatttcccatttacgcttcaagggatagttccagatatcgtgata
aatcctcatgcatttccaacgcggcaaactcttggccagctgtttgagtctgctttgggg
aagggtattgcttgcgatggttcagtgagatatgccacccctttcagtacaccttcgatt
gatgatgttacgaatcagctgcgcagggccggatatgagaggtggggatctgagaaattt
tgtaatggtcgaactggtgagatgatgcagtccttgatcttcgtcggtcctacattctat
caaagattgatccatatggctgaagataaagtgaagttcaggaacacagggccagtgcac
ccactcactcggcagcctgtatcagatcggaagcgttttggtggggtcaaatttggtgag
atggagcgcgactgcctcatagcccatggtgcctcagctaacttgcatgaacgcttgttc
actctcagtgatttctctcagatgcacatttgccagaagtgcaccaacattgcaaatgtt
atccagaggtcattgcctggaggcaggaagattcgaggtccatattgccggttttgtgag
tctgctgagaatatagtgaaggttaatgtgccatatggagctaagttgctgtgccaggag
cttttcagcatgggcatatcagtcaagtttgacacccaagtctgttga

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