Trachemys scripta elegans (red-eared slider): 117867433
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Entry
117867433 CDS
T07347
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117867433 (SLC6A4)
Transporters [BR:
tst02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117867433 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
DUF3439
Motif
Other DBs
NCBI-GeneID:
117867433
NCBI-ProteinID:
XP_034608340
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Position
18:complement(2537101..2575893)
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AA seq
670 aa
AA seq
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MEKSSSNETQTLTSKKELLDCTEGEDCQENGLLVKNPKSTLQLVEDGNKVHPSQGDKGEA
GQISNGYSVVQSPVPCNGIGDGEDVQCTAPAATTTTTTTTTSTTCGVEAQPQLLELEERE
TWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFTICVIAFYIASYYNTIMAWALYYLISSFTSELPWTSC
KNAWNTVNCTNYFTNASITWTPHSISPAEEFYTRHVLQVQRSKGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLIRGATLPGAWRGVVFYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQDALVTSTVNCMTSFVSGFVIF
TVLGYMAEMRNEEVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITAVLDEFPHVWGKRREWFVLGLIIACFLGSLTTLTFGGAYVVKLFEEYATGPA
VLTVVFLESIAVAWFYGINQFCRDMKEMLGFTPGWYWRLCWVAISPIFLLFIICSFMSSP
PDLRLFDYNYPYWTTIVGYCIGTSSVICIPIYMAYRLIITPGTFKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatccagcaatgagacccagactcttacctctaagaaagagctcttggac
tgtacggaaggtgaagattgccaagagaatggactcctggtcaagaaccctaaatccacc
ctgcagctggtggaggatgggaataaggtccaccccagccagggagataaaggggaagca
ggtcagatctccaatggctactcagtggttcagagcccagttccttgcaatggaatagga
gatggggaagatgtccagtgcacggccccagcggccaccactaccaccaccaccaccacc
acttccaccacttgtggggtggaggctcaaccacagctgctggagctggaggaaagagag
acctggagtaaaaaaatggactttcttctctctgtcattggctatgcagtggatctgggc
aatgtatggcgatttccctatatatgctaccaaaatggaggaggagcgtttctcatcccg
tacaccatcatggccatctttggaggcatccccctcttttacatggagctagcactggga
cagtaccacaggaatgggtgtatctcaatttggaggaaaatttgtcctattttcaaagga
attggctttactatctgcgtaatagctttctacatagcctcttactacaataccatcatg
gcttgggccctctactacctcatttcatccttcacgtcagagcttccatggaccagctgc
aaaaatgcttggaacaccgtcaactgcaccaactacttcaccaatgccagcattacctgg
accccacactccatctcccctgcggaagaattttatacccgccacgttctacaggtgcaa
agatccaaagggctggatgatctgggaggcattagctggcaactgacactctgcttactg
ttgatattcactatcgtgtacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgactgccacgttcccttacatcatactctttatcctgttaatacgaggggcc
acactgcctggagcctggaggggggttgtcttctacctgaagcctgactggcagaaactc
ctggccactgaggtctgggtggatgctgcagctcagattttcttctctcttggtccaggt
tttggggtcctactagcttttgccagctacaacaaattccacaacaactgctaccaggat
gcattggttaccagtacagtgaactgcatgactagttttgtgtctggatttgtcattttc
actgtgcttggatatatggctgaaatgaggaatgaagaggtgtcggaggttgctaaagat
actgggcccagccttctcttcattacctacgcagaggccattgcaaacatgcctgcttcg
actttttttgctatcatatttttcttgatgttactcactctgggattagacagcacgttt
gcagggctggagggggtgatcactgcggtgctggacgaattcccacatgtttggggaaag
cgcagggaatggtttgtccttggtctgatcatcgcttgcttcctggggtcattaacaacc
ctgacattcggtggtgcatatgtagtgaagctgtttgaagaatatgctacaggccctgct
gtcctaacggtggtgtttctggaatccattgcggtggcctggttctatggcatcaaccag
ttttgcagggacatgaaggaaatgctgggcttcactccaggctggtactggcgactctgc
tgggtagcaatcagccccatcttccttttgtttatcatttgcagttttatgtccagccct
cctgatctacggctttttgattataactatccctactggaccactatagtgggttactgc
ataggaacctcctctgttatctgcattccaatctacatggcttatcggttgataatcact
ccaggaacatttaaagagcgtattctaaaaagcattaccccggagacagccacagaaatt
ccctttggggacatccgcatgaatgcagtttag
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