Trachemys scripta elegans (red-eared slider): 117867976
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Entry
117867976 CDS
T07347
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00531
Glycosaminoglycan degradation
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00076
Dermatan sulfate degradation
tst_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117867976 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117867976 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
tst02042
]
117867976 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117867976 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117867976 (SPAM1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
117867976 (SPAM1)
Bacterial toxins [BR:
tst02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
117867976 (SPAM1)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Enzymes
117867976 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Enzymes
117867976 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
117867976
NCBI-ProteinID:
XP_034609444
LinkDB
All DBs
Position
1:complement(40421839..40429661)
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AA seq
582 aa
AA seq
DB search
MPLYILSHSLTEMETLRQVQSFGSFVASNRASWLVFIIILVTCCSSLHIRARPLIPNSPF
ISIWNAPTELCTEKTRVQLDMRLFHLVGSTLKTSTEQNTTIFYANRLGNYPYIDENTGET
FNGGIPQLCSIEHHLKKANDDINFYMPSDEQVGLAVIDWENWRPLWIRNWGSKDIYRQMS
VEFVQQKDLSLSETQARTLAKMEFEAAAKSLMLQSLKLGISMKPNHLWGYYLYPDCYNYD
YNQNPHNYTGSCLDIEIARNNELNWLWEESTALYPSVYLETALRSSKNAPLFVRNRVQEA
IRVSNVSNSTCPLPIFVYTRPVFTDFNQEYLSQDDLVNTIGESAALGVSGIVIWGDLNLT
LSVNTCRALDSYLRHTLNPYIINVTMAAKICSQVLCRDSGACARKNWNSSDYLHLNPENF
VIQMSRNGKYAIQGQPAFQDLQRFIEKFYCRCYAGYNCEPSVDLNDIHYVNACISEDICV
QVSLNSLSNVEASGARASSNTSIFSFTPQRNITLPAHNATGGFQQTIWNNTFNVSTAEHI
NAPTNSSGDFKITSTHSFSGSSSDEMKILDVVYLILILRNLI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgccattgtacatactgagccattcactaactgaaatggaaaccctaaggcaagtccaa
agcttcggtagctttgttgcctctaacagagcatcctggctggtgttcatcattattcta
gttacttgctgctcatctttgcatataagagcccgtcctctcatccccaattctcctttc
atctccatctggaatgctcctacagagctttgcactgagaagactcgagtgcagctggat
atgagactcttccatttggtaggaagcacattgaagacatccactgagcagaatactact
atattctatgctaacaggctcggcaattatccttacatagatgagaacacaggtgagaca
tttaatggtgggatcccccaactctgttccattgagcatcatttaaaaaaagccaatgat
gacattaatttttacatgccttcagatgaacaggttggcttggctgtcatcgactgggaa
aactggaggccattatggatacggaactggggatcgaaagacatttacagacagatgtct
gttgagtttgttcagcaaaaagatttaagcctatcagaaacccaagccaggactttagcc
aaaatggaatttgaagctgcagcaaaatcacttatgttgcaatctttaaaactgggaata
tcaatgaagccgaatcatttgtggggatactacctttaccctgactgctataactatgat
tacaaccaaaatccccacaattatacaggaagctgtttagatattgaaatagcaagaaat
aatgagcttaattggttgtgggaggaaagcacagcactttacccatctgtctatctggaa
acggccttgagatcttccaaaaatgcaccactctttgttcgtaatagagttcaagaagcc
attagagtttctaatgtttcgaattccacctgtccacttcccatttttgtatatacacgt
ccagtattcacagatttcaatcaggaatatctctctcaggatgaccttgtaaataccatt
ggagaatctgctgcattaggggtgtctggaattgtaatctggggagacctgaatttaaca
ctgagtgtgaacacttgcagagctctggacagctaccttaggcacactctgaatccttac
atcatcaatgtaaccatggcagccaaaatctgtagtcaggtattatgccgtgactctggt
gcctgtgcacgaaagaactggaactccagtgactatcttcatctgaacccagagaatttt
gtcattcagatgtcaaggaatgggaaatatgccatacaagggcagccagcatttcaggat
ctgcagcgatttatagaaaagttttattgccgctgttatgcaggctacaattgtgaacct
agtgttgatctaaatgacatccactatgtcaatgcctgcatttcagaagatatttgtgtt
caagtatccttaaattcactttctaatgtagaagcctctggggctagagcctcttccaac
acgagtatattttcatttaccccacagagaaacataacattacctgcacataatgcaaca
ggaggttttcagcaaactatttggaataacacattcaatgtatctactgcagaacacatc
aatgccccaactaacagtagtggtgatttcaagataaccagtactcatagcttcagtggt
tcatcttctgatgagatgaagatattggatgtggtttatttaattctaattttgagaaac
ctaatctaa
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