Trachemys scripta elegans (red-eared slider): 117868032
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Entry
117868032 CDS
T07347
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00260
Glycine, serine and threonine metabolism
tst00270
Cysteine and methionine metabolism
tst01100
Metabolic pathways
tst01230
Biosynthesis of amino acids
Module
tst_M00035
Methionine degradation
tst_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
117868032
00270 Cysteine and methionine metabolism
117868032
Enzymes [BR:
tst01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
117868032
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Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Peptidase_S29
Motif
Other DBs
NCBI-GeneID:
117868032
NCBI-ProteinID:
XP_034609509
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All DBs
Position
1:complement(192620530..192667856)
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AA seq
557 aa
AA seq
DB search
MAFVSTLNRKIKSSHLQNGIDTENQETKTNYTWLPPNLPSKCTWKPGKPISDSPHSHVPL
PEETNILPNILKKVGRTPLVRINKIGKAYGLKCELLAKCEFFNAGGSVKDRIALRMVEDA
ERAGIIKPGDTLIEPTSGNTGIGLALVAAVKGYRCIIVLPEKMSMEKVDILRALGSEIVR
TPATNFDSPESNVSVARRLRYEIPNSHILDQYRNPGNPMAHYDTTAEEILEQCEGKVHMV
VGGAGTGGTITGIGRKLKEKCPECKIVGVDPEGSIVALPSELNTAEDATMEVEGIGHDFI
PTVLDRSVVDLWCKSNDADSFLMARRLIREEGLLCGGSSGSAMSIAVKAARTLTEGQRCV
VILPDSVRNYMSKFLNDRWMGKNGFLKNVQEHKPWWWNVKVQKLNLSAPLLLVPEVNCQK
AIEILKEKGYAQAPVVAESGHILGMVTPSNILSSVLAGNAQFSDPVIKVISDQFSKISLD
DNLGNLSSILENDHFAIVVHDQMQYIGDGSYAKKQMVFGVVTALNLLNFITRKDKSQQQK
VASSRGSIASDESEISH
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgtgtccacactgaacaggaagatcaagagctctcatttgcagaatggcatt
gatacggaaaatcaggaaaccaaaaccaattatacatggcttcctcccaacttgcccagt
aagtgcacatggaagccagggaagcccatctccgactcacctcattcccatgtgcctttg
ccggaagaaacaaacatcctgccgaatattctgaagaaagttggccgcacccctctggtt
cgaatcaacaagattgggaaagcctatggactgaagtgtgagctcttagcaaagtgcgag
ttcttcaatgctggggggagtgtgaaggatcgaatcgccctcaggatggtggaggatgcc
gaaagagctgggatcataaaacccggagacacactcattgagccaacatcaggaaacaca
ggaatcgggctggccctggttgctgcagtgaaaggctatcgctgcatcattgtgttgcca
gagaaaatgagcatggagaaggttgatatactaagggctcttggttctgagattgttagg
actccagccaccaactttgattcccctgagtctaatgtttctgttgctcggaggctgaga
tatgaaatcccgaactcccacattctggaccagtaccgaaatcccggcaacccgatggct
cattatgacaccaccgctgaggagatcctggagcagtgcgaaggcaaggtccacatggtt
gtgggtggagctgggacaggaggtaccatcactggcattggcagaaagctgaaggagaag
tgcccggaatgcaaaattgttggtgtagatcctgaaggttccattgtcgctctgcccagt
gagctgaacacggcagaggacgcaaccatggaagtagaggggattggacatgactttatc
ccaactgtccttgacagatcagtggtggatctgtggtgcaagtccaatgacgcagattcc
tttctcatggctcgcaggctgattagagaggaaggattattgtgtggtggcagctccggc
agtgcaatgtctattgctgtgaaggctgccaggactctgacggagggtcagcgctgtgtt
gtcatcttgcccgactccgtcaggaactacatgtccaagttcttgaatgataggtggatg
ggcaagaatggatttctaaaaaatgtccaggaacacaagccttggtggtggaatgtcaag
gtgcaaaagctgaatctctcggcccctctgcttcttgtcccagaagtcaactgtcaaaag
gcaatcgaaatcctcaaggagaagggctacgcccaggcgccagtggttgctgaatctggt
cacattctgggaatggtgactcccagtaacatcctctcctccgtgctggctggaaatgct
cagttctcagatccagtcatcaaggtcatcagtgaccagttttcaaagattagcctggat
gacaacctcggaaacctctctagtatcctggagaatgatcattttgctatagttgtacat
gatcagatgcaatacattggagatggcagttatgccaagaagcagatggtgtttggagtg
gtgacggccctgaatctcctgaacttcattacccgaaaggacaagagccagcaacaaaaa
gttgcttcatcaaggggctctattgcctcagatgaatctgaaataagccactga
DBGET
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