Trachemys scripta elegans (red-eared slider): 117868042
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Entry
117868042 CDS
T07347
Name
(RefSeq) hyaluronidase-1-like
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00531
Glycosaminoglycan degradation
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00076
Dermatan sulfate degradation
tst_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117868042
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117868042
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
tst02042
]
117868042
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117868042
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117868042
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
117868042
Bacterial toxins [BR:
tst02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
117868042
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Enzymes
117868042
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Enzymes
117868042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
DL-JAG_EGF-like
EGF
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
117868042
NCBI-ProteinID:
XP_034609557
LinkDB
All DBs
Position
1:complement(40528500..40546686)
Genome browser
AA seq
479 aa
AA seq
DB search
MCNLWIKWIEITMLLIMVDGQLLKQAKAPLLLHKPFIVVWNAPTEQCRLRYKVDLDLRVF
DIASNTNETLSGSNVTIFYHTHLGHYPYYLDNGVPINGGVPQNESLIKHLNKAKSDIDHS
IPMKKFQGLAVIDWENWRPQWDRNWGNKTIYRNKSLELVRRHHPQWSEDKIRKVAKEEFE
NAGKSFMNNTILLAEHMRPNGLWGYYLYPDCYNYDYKEHPKVYTGRCPDIESSRNDLLLW
LWKESTALYPSIYLDYILKSSPNALKFVHYRVKEAIRIASVARKDYVLPVFVYSRPFYAY
TLHVLTETDLVNTIGESAALGAAGVVLWGSMQYASSKESCSVVKKYIDGPLGHYVINVTS
AAKLCSKVLCKKNGRCIRKIGDSSAYLHLSPNSFEIGVHHSEKGPRFFVTGKPRPEDIKA
MKQSFTCQCYQGWTGIFCELPDRSLLEQWAHTLFNRSKNKMLNFLLFGSMQVFLLLIIH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatctgtggattaaatggatagaaattacaatgctgcttattatggttgatggc
caactgctcaagcaggcaaaggccccactgctactccacaaacctttcattgttgtttgg
aatgcacctacggaacagtgcagactgcggtacaaggtggacctagatctcagagttttt
gacattgcatcaaacaccaatgaaactttgagtggctccaatgtgacaatcttttatcac
actcatttggggcattacccctattacttagacaatggggttcctatcaatggaggggtg
ccacagaatgagagtctaataaaacaccttaacaaagctaagtctgacattgaccattcc
atacccatgaagaaattccaaggacttgcagtcattgactgggaaaactggaggccccag
tgggacaggaactggggtaataaaaccatttatagaaataagtctctcgaactggttagg
agacaccatcctcagtggtcagaggacaaaattaggaaagttgctaaggaagaatttgaa
aatgctggcaagagttttatgaacaacactatccttctggctgagcacatgagaccgaat
ggtctatggggttattatctttacccagactgctacaattacgattacaaagaacatcca
aaagtatacacaggtagatgcccagacattgaatcgtcccgcaatgatctcctgctttgg
ctgtggaaagaaagtaccgctctttatccatccatctatctggattatatattgaagtca
agtccaaatgctctgaagttcgttcattatcgggttaaggaagcaatacgtattgcctca
gttgctagaaaagactatgttttgcctgtttttgtttactccagaccattttatgcctat
actttacatgttttgacagagactgacctggtgaacactattggagagagtgctgctttg
ggggcagcaggggttgtcctttggggaagcatgcagtatgccagctcaaaggagagctgt
tcagttgtgaaaaaatacatagatggccccttaggacattatgtcattaatgtcacctca
gcagccaaactctgcagtaaagttctgtgtaagaaaaatgggagatgcatccgtaaaatc
ggtgactcttctgcttatctgcacttgtcacccaatagttttgagattggggtccaccat
tctgaaaaaggcccaagattctttgtgactggaaaacctagaccagaagacataaaggcc
atgaagcagagcttcacatgtcagtgttaccaaggctggactgggatattttgtgaactg
cctgaccgaagtctacttgaacaatgggctcacactttgtttaacagatcaaaaaataaa
atgctcaactttcttttatttggatccatgcaggtttttctgcttctcattatacactaa
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