Trachemys scripta elegans (red-eared slider): 117869912
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Entry
117869912 CDS
T07347
Symbol
NECTIN4
Name
(RefSeq) nectin-4
KO
K06593
poliovirus receptor-related 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tst04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117869912 (NECTIN4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117869912 (NECTIN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117869912 (NECTIN4)
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
Nectin family
117869912 (NECTIN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
V-set
C2-set_2
I-set
Ig_2
Sema4F_C
Ribosomal_60s
Adeno_E3_CR2
Stevor
EVC2_like
TM_ErbB1
TMEM154
EphA2_TM
ECM10
DUF4446
PAXIP1_C
Motif
Other DBs
NCBI-GeneID:
117869912
NCBI-ProteinID:
XP_034612906
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All DBs
Position
24:complement(5019954..5066790)
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AA seq
525 aa
AA seq
DB search
MSGSFAPAPAPAAWKLLLLCLAASGSLAGVLEMERSVTVVLGQDVVLPCRYRAQEGEKVV
QVTWLKQGADGQNVEVAVLNLEYGEHVQEPYAGRVLRRAPGPLEDGAIVLKNAVQADEGA
YECRLITFPSGNFQDSMTLSVLVPPLPSLNPGPRLEEGQGRTLAASCTAEGNPMPTVTWE
TQVHGTNSTRQSLHPRSASVTSEFFLVPGRSMNGKTLTCVVSHPGLPHEKRITHVLNVAY
LSDASVRGHEEEEDWQAGKEGVSLKCLGEGNPPPTYNWTRLNGPMPEGVKVKGATLLFQR
PLTPDDTGIYICQVANRFAAKEVRASISIKESELQKVNVVSASVVVVGVIAAVLLCLLVL
VVVFMTLYHRRKTRRISEKYEEELTLTRENSIRRLYSSHSASTRNQTEETLHLRGDSRQG
SLRGDSLRGTSICSVMSEEAEGRSYSTLSTVREIETQTEQPPAPAPAPEEEKEEKEKERE
EEEEEEEREENTIKAAMTHFVQENGTLRAKPTTNGIYINGRGHLV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtccttcgcaccggccccggcccccgcggcttggaaactcctgctgctctgc
ctcgcagcctccgggtccctggcgggggtgctggagatggagcgcagcgtcaccgtggtg
ctgggccaggacgtggtgctgccgtgccgctatcgggcgcaggagggcgagaaggtggtg
caggtgacgtggctgaagcagggcgccgacgggcagaacgtggaggtggcggtgctgaac
ttggagtacggggagcacgtccaggagccctacgcagggcgggtgctgcggcgggcaccg
gggccgctggaggacggcgccatcgtgctgaagaacgccgtgcaggccgacgagggcgcc
tacgaatgccgcctcatcaccttcccgtcgggcaacttccaggacagcatgacgctcagc
gtgctggtgcccccgctgccatccctgaaccccggcccccggctggaggaagggcagggg
aggacgctggccgcctcctgcacagccgagggcaaccccatgcccaccgtaacctgggag
acgcaggtgcacggcaccaacagcacccgccagtccttgcacccccgctcagcctccgtc
accagcgagttcttcctggtgcccgggcgcagcatgaacggcaagacgctcacctgcgtc
gtcagtcacccggggctgccgcacgagaagaggatcacccacgtgctgaatgtcgcctat
ctctcggacgcctcagtgcgagggcacgaggaggaggaggactggcaggcgggcaaggag
ggcgtctcgctgaagtgccttggtgagggcaaccccccacccacctacaactggacccgg
ctcaacggccccatgcccgaaggagtgaaggtcaagggggccaccctcctcttccagaga
cccctcacccccgacgacacaggcatctacatctgccaggtcgccaacaggtttgcggcc
aaggaggttcgggccagcatcagcataaaagagagcgagctgcagaaggtgaacgtggtc
tcggcctcggtggtggtggtgggcgtcatcgcggccgtgctgctctgcctgctggtcctg
gtcgtcgtgttcatgaccctctaccaccgacggaaaaccaggcgcatctccgagaaatat
gaggaggagctgaccctaacgagggagaattccatccggcgcctgtactccagccacagc
gccagcacccgcaaccagacagaggaaaccctgcacctgcggggggacagccggcaggga
agcctgcggggggacagcctgcgtggcaccagcatctgctccgtcatgagcgaggaggca
gagggacgcagctactccaccctgtcgacggtgcgggagattgagacgcagacggagcag
cccccggccccagcgcccgccccggaggaggagaaggaggagaaggagaaagagagggag
gaggaagaggaggaggaggagcgggaggagaacaccatcaaggcggccatgacccacttt
gtgcaggagaacggcacgctgcgggccaagcccaccaccaacggcatctacatcaacgga
cggggccacctggtgtga
DBGET
integrated database retrieval system
