Trachemys scripta elegans (red-eared slider): 117871134
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Entry
117871134 CDS
T07347
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03410
Base excision repair
tst04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117871134 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117871134 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117871134 (PARP4)
03036 Chromosome and associated proteins [BR:
tst03036
]
117871134 (PARP4)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117871134 (PARP4)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
117871134 (PARP4)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
117871134 (PARP4)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117871134 (PARP4)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
117871134 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
VWA_2
BRCT
BRCT_2
VWA_CoxE
PARP_reg
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
117871134
NCBI-ProteinID:
XP_034614696
LinkDB
All DBs
Position
1:complement(307696642..307774316)
Genome browser
AA seq
1426 aa
AA seq
DB search
MTVAIFANCVFFLKVKHLPIQEKNRLRTCIKENGGIIYFVLNHECTHVIVDNVAVLRSYH
LKTIEKYRLPIVSADFVWKSAEEGKLLPIDYESSKSLEGSSDQKPSHYGEKNHSSSERDI
KEKQDATEKNENCGPDHTPLEVSESSVGPNMESIRFYTENDQDIPYFPQYFEVAKYDALE
KISTEKGKQVVVIELQCSQESCEFPFRISAHFSMSDGFKSKKQFIATKTSEEIRENYEIY
VEDLKNQDFLLRETFPPGAEYLASMKLQELLLEEAINSSTLSQEISAFVELIWAEALGHL
DHLLLEPVNNISLNDVSKGEGILLQIKNAMNEGTAAKALKAMMMEFYRIIRHKNGIDYNI
TKKLLSSKQDLCQLIRDMLNVCETSTSSPNPPSLAKYRALRCKIQAINPNSEEFLNVKQQ
VLKNNHSDCPVKVLQIYRVGRISETAEFLSNLGNVQSLFHASSVRNFVGILSRGLLLPKI
VVEDHGMERTDFGKLGSGIYFSDSISTSTKYSPPSEMDGTRLLAVCNVALGTCLDLYKKD
LSLTNAPAGYDSVHGVRKRGNIYSDFEDDEFVVYKTCQVKMRYIVKFCLAGDQVKQFQPG
TETELEQDWPATSHCHLQPEDYALPSVNLLNHVKTGLQDTSGNPVPLEDIHIKGRIIDFI
AQIVVFQTYTNQNNSSIEAKYVFPLDGTAAVCGFEAFINGKHIVGKVKEKAQAHKEYREA
ISRGDGAYLMDQDAPDVFTVSVGNLPPKTTVLIKVTYITELSFQNGCITFQMPAAVAPWQ
QDKALNENTQDTVKKVCVKQIGTKKGGFCVAMSIEMPYSIERIHSWTHTLKIKKTDCKAV
IRTVDNSSLDICGFALEIWISQVYLPRMWVEKHPNKESEACMLVFQPKFETRFKGIQLSG
EIIICLDCSNSMEGSTLQQAKQIAVHVLQMSCFGQRVNVIRFGTNFTEFSSYSKNIKSDL
AEVKEFIISATPTMGNTDLWKTLRYLSLLYPSQRERNILLLSDGHIQNESMTFQIVKENV
RHTRLFTCGVGSTANHHMLRSLSQYGAGAYEYFDPKSKYNWLKKIESQTSRIFSPGCSSV
SIKWQQFDSNAPEPLQAPAQIQSLFNNERLLVYGFIPRCTQATLNALINDQELQAMVSTT
ELQKTTGTLLHKLTARALIRDYEDGILHENETEHEMKKHTLKVLIINLSVEHSIITQFTS
FVAVEKRDVNEVQHAGLPNILELIAEEDIDFLPYMDWEHDTSGHGYVFSNRGVGFGRCKL
TSYCADEPGGALTPEETESREELLMASYFGETDDTYRAKVVFPQTTTAAFLSGQLVGTGD
IPDSAQRLEGMVLPTAASSRPKRDTAVLALPGWQGADTRIRYSENEQDANEVQHAGLPNI
PMAPERLDILPYMDWEHDTSGYGYLFSNRGMGESIMSTVGVPSWTV
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggcaatctttgcaaactgtgtgttctttcttaaagtgaaacacttacccatt
caggagaagaatagactgagaacatgcattaaagaaaatggtggaataatttattttgtg
ctaaatcatgagtgtacacatgtcattgtggataatgttgctgtactccgctcttatcat
ctgaaaactattgagaagtatcgactccccattgtaagtgccgattttgtgtggaaatca
gctgaagaaggaaaacttttaccgattgactatgagtctagtaaatcattggaaggtagt
tctgaccaaaagccaagccattacggtgagaaaaaccactcatcttctgagcgtgacatt
aaagagaaacaggatgccactgagaagaatgaaaactgtggccctgatcacactcccttg
gaagtcagtgagagctccgttgggcccaatatggagagcatcagattttatacagaaaat
gatcaagatattccttattttccacaatattttgaagttgcaaaatatgatgcccttgaa
aaaattagtactgagaaaggcaaacaagttgtagttattgaattgcagtgttcccaggaa
tcgtgtgagtttccctttcgaatatctgcacacttcagcatgtcagatggattcaagagt
aaaaaacagttcattgcaactaagacttctgaagaaataagagaaaattatgagatttat
gttgaagatttgaagaaccaggattttctattaagagaaacctttccacctggtgcagaa
tatttagcctctatgaaattacaagagctacttctagaggaagccataaattcaagcact
ttatcccaagaaattagtgcttttgtggaactgatctgggcagaagcacttggtcatttg
gaccatttactacttgaaccagtaaacaacatcagcctaaatgatgtgagcaaaggggaa
ggtattctacttcaaataaagaatgcaatgaatgagggaacagcagcaaaggcactgaaa
gcgatgatgatggagttctatcgaattatacgtcacaaaaatggaatagactataatatt
accaaaaaactgttatctagcaaacaggacctctgtcagctaatcagagacatgcttaat
gtttgcgaaacaagtacgtcaagccctaacccaccatctcttgctaaataccgggcttta
aggtgcaagatacaagctatcaatccaaacagtgaagaatttctcaatgttaaacagcag
gtgttgaaaaataatcacagtgactgtccagtgaaagttttacaaatatacagagttggc
agaataagtgaaacagcagagtttctgagcaatcttgggaatgttcaatccttattccac
gcatcatctgtgcgcaacttcgttggaattctctcccgaggtctccttttaccaaagata
gtggttgaagatcatggcatggaaagaactgattttgggaagctggggagtggcatttat
ttcagtgattctatcagtacaagcactaagtattctccaccaagtgaaatggatggaact
cgactgttggctgtgtgtaatgtggcacttggaacctgcttggatttgtataaaaaagat
ttgtcattgactaatgcgccagcaggatatgacagcgtgcatggagtccgtaaaagagga
aacatctattcagattttgaggatgatgaatttgttgtatacaaaacctgtcaggttaaa
atgagatacattgttaagttttgccttgctggagaccaagtaaagcagtttcagcctgga
actgagacagaattagagcaagattggccagcgacctcacattgtcatttacaacccgaa
gactatgcattaccaagtgtaaatcttttaaaccatgtaaaaactggtcttcaggacaca
tctggaaacccagtccctcttgaagatattcatatcaaggggaggataatagacttcata
gcacagatagtagtgtttcagacatacaccaatcagaacaatagttccattgaggcaaaa
tatgtctttcctttggatggcacagcggctgtatgtggatttgaggctttcatcaatggg
aaacatattgttggaaaggttaaagaaaaggcacaagcacataaggaatatagagaagca
atcagtcgaggtgatggagcttacttgatggaccaggatgccccagatgtttttactgta
agtgttggaaacttaccacctaaaaccacagttcttatcaaagtcacctacatcactgag
ctgagttttcagaacggctgtattacttttcaaatgcctgcggctgtggcgccttggcaa
caagacaaagccttaaatgaaaacacacaggatacagtaaagaaggtttgtgttaaacaa
ataggaacaaaaaagggtggattctgtgtggccatgtctattgaaatgccatacagcatt
gaacgcattcatagttggacgcacacacttaaaataaagaaaacagactgcaaagccgta
atcaggactgtggacaatagttccttggacatctgtggctttgctctagaaatctggatt
tctcaagtatatcttcccagaatgtgggtagagaagcatccaaacaaagagagtgaggca
tgcatgcttgtatttcaaccaaagtttgaaacaaggtttaaaggaatccaactgtccgga
gaaattattatttgtctagattgctccaattccatggagggttcaacactgcaacaagca
aagcagattgctgtccatgttctacaaatgtcttgttttggacagagagtgaatgttatc
agatttggcacgaattttacagaattttcttcatattcaaagaatatcaaaagtgatctt
gcagaagtgaaggagtttattatatctgctacaccaacaatgggaaatactgacttatgg
aaaaccttacgttatttaagtttgttgtatccttctcaaagagagcgtaacattcttctt
ctatccgatgggcacattcagaatgagagcatgaccttccaaattgtgaaagagaatgtc
agacacaccaggttatttacatgtggtgttggttccacagcaaatcatcacatgctgaga
tctttgtctcaatatggtgctggagcatatgaatattttgacccaaaatcgaagtataac
tggctaaaaaagatagaaagccagacatccagaatattttctccaggatgcagttctgtc
tctattaaatggcaacagtttgactcaaatgcaccagagccattgcaggctcctgctcaa
atacagtctttatttaacaatgaaagacttcttgtctatggatttatcccacgttgtact
caggccaccttaaatgcactaataaatgaccaagaattgcaagcaatggtatcaaccact
gaattacagaagacaacaggaacactactccacaaactcacagcaagagccctcattagg
gattatgaagatgggatacttcatgaaaatgaaacagaacatgagatgaagaaacacact
ttgaaagtcctgattattaacctcagcgtggagcactccatcataacccagtttacaagc
tttgtggcagtagaaaaaagggatgttaatgaagttcagcatgctggccttccaaacatt
cttgaacttatagctgaggaagatatagactttttaccctacatggactgggagcatgat
acatctggacatggatacgtgttttctaatagaggagtgggatttggcagatgtaaattg
acctcttactgtgctgatgaaccaggcggtgccctgaccccagaggagaccgagtccagg
gaggagctgctgatggctagctacttcggggagacggatgacacctacagagccaaggtt
gtatttccccagaccaccactgctgctttcctgtctggccagctggtggggacaggggat
atccctgacagtgcacagagattagaaggcatggtcctaccaacagcagcctctagcagg
ccgaagagagacactgcagtgctggctctgcctggctggcaaggagctgacaccaggatc
cgctattcggaaaatgagcaggatgctaatgaagttcagcatgctggtcttccaaacatt
cctatggctccagaacgtttagacattttaccctacatggactgggagcatgatacatct
ggatatggatacctgttttctaatagaggaatgggtgaatcgatcatgtccacagtgggg
gtaccatcatggacagtatga
DBGET
integrated database retrieval system
