Trachemys scripta elegans (red-eared slider): 117872518
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Entry
117872518 CDS
T07347
Symbol
GLB1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00052
Galactose metabolism
tst00511
Other glycan degradation
tst00531
Glycosaminoglycan degradation
tst00600
Sphingolipid metabolism
tst00604
Glycosphingolipid biosynthesis - ganglio series
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117872518 (GLB1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
117872518 (GLB1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117872518 (GLB1)
00604 Glycosphingolipid biosynthesis - ganglio series
117872518 (GLB1)
00511 Other glycan degradation
117872518 (GLB1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117872518 (GLB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117872518 (GLB1)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
117872518 (GLB1)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117872518 (GLB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Motif
Other DBs
NCBI-GeneID:
117872518
NCBI-ProteinID:
XP_034616913
LinkDB
All DBs
Position
2:complement(81124046..81210566)
Genome browser
AA seq
678 aa
AA seq
DB search
MRRGSGGCCDHIGRRLLQLGPAMLRLLLRAAGLVALLPVGLGAANASQRSFGIDYDKNYF
LKDGKPFRYISGSIHYSRVPRYYWKDRLLKMKMAGLDAIQTYVPWNYHEFKPGVYNFSGD
RDIEYFLQLANEIGLLVILRAGPYICAEWDMGGLPAWLLEKESIVLRSSDLDYLVAVERW
MGVLLPKMKPHLYQNGGPVIMVQVENEYGSYFACDYDYLRYLQKLFHHHLGDEVVLFTTD
GASKHYLRCGALQGLYATVDFAPGGNVTAAFLTQRGSEPRGPLVNSEFYTGWLDHWGHPH
SVVPTNTIAKTLDEILARGANVNMYMFIGGTNFAYWNGANMPYSSQPTSYDYDAPLSEAG
DLTDKYFALREVIGRYNHLPEGPIPPTTPKYAYGRVTMEKLGTVAELLDDLSPSGPIRST
YPLTFVQLQQYFGFVLYRTTLPKNCSEPTPLFSPLNGVHDRAYVSVDGVPQGVLERGKSY
AINITGKAGSNLDVLVENMGRVNYGRYNNDFKGLVSNLSLGQVTLVDWEIYPLDIDSVVG
LGLNSRGDESKTSGGNPSSYAAPAFYTGRLSIPSGIPDLPQDTYIKFPGWTKGQIWINGF
NLGRYWPVRGPQVTLFVPSNILVSSSPNNITVLELELSPCGIQKCTIEFVDKPDINATLQ
YENNNRKLFTKDLWLDPL
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtgggtcaggcgggtgctgcgatcatatcgggcggcgtctcctgcagctcggg
ccggccatgcttcgccttctgctccgagcggccgggctggtagcgctgcttcccgtgggg
ctcggcgcagctaatgcatcccagaggagttttgggatcgattatgacaagaactacttc
ctcaaggatgggaaaccattccgctacatctcgggcagcattcattactcccgtgtgccc
cggtactattggaaagaccgtctgttgaagatgaagatggcagggcttgatgctattcaa
acgtacgtgccatggaactaccatgaattcaaaccaggagtatataacttctctggtgac
cgagatatagaatatttcctgcagctagctaatgaaattggcttgttggtaatactaaga
gctggaccttatatctgcgcagaatgggacatggggggtcttccagcatggttattagag
aaagaatctattgttctccgatcttctgatttagattacttggtagctgtagaaaggtgg
atgggtgtcttattacccaaaatgaagcctcatctctatcagaatggagggccagttatt
atggtgcaggttgaaaatgaatatggaagctactttgcctgtgattacgattaccttcgt
taccttcagaagctcttccatcaccatcttggagatgaggtggtactgtttacaacagat
ggggcaagcaaacattacttgagatgtggagctctgcagggtctttatgcaacggtggac
tttgcaccaggtggtaatgtcacagcagcatttttaactcaacgaggcagtgaacccaga
ggccccttggtaaactctgagttctacactggctggctggatcactggggtcaccctcat
tctgttgtgccaacaaatacgatagctaaaactcttgatgaaatcctggcacgtggcgct
aacgttaacatgtacatgtttataggtggaaccaattttgcctattggaatggggcaaac
atgccatattcatcacagcctactagttatgactatgacgctccactgagtgaagcaggg
gacctcactgacaaatattttgctctgagagaagtcattggtaggtataatcacttacct
gagggccctatcccgccaacaacacccaaatatgcatatgggcgagtgacaatggagaag
ctaggcacagtagcagagcttcttgatgacctgtcaccctctgggccaataagaagcact
taccccttaacctttgttcagctgcagcagtattttgggtttgtgctgtacaggactacc
ctgccaaaaaattgtagtgagccaacaccactcttttcgcctttaaacggagtccacgac
cgtgcctatgtctctgtagatggggttcctcagggagtccttgaaagaggcaaatcatac
gcgataaacataaccgggaaggctggatcaaatctggatgtgttggtagaaaacatgggt
cgagtaaactatggtagatacaacaatgactttaagggtctagtgtcaaatttatctctt
ggccaagttacgctcgttgactgggagatctaccccctagacatagacagtgtggtgggc
cttggcctaaacagcagaggtgatgaatcaaaaacatctggtggtaatccctcaagctat
gcagctcctgctttttacactggcagactttctattcccagtggaatccccgatttaccc
caagacacctatatcaagtttcctggctggacaaagggacaaatttggatcaatggcttt
aacctcggtcgttactggccagtccgtggtcctcaagtgaccctatttgttccaagcaac
atcctcgtttcatcgtcaccgaacaatatcacagtgttggagctggagctgtctccttgt
ggcattcagaaatgtaccatagaatttgtagacaaacctgatatcaatgcaacactgcag
tatgaaaacaacaaccggaagctgttcactaaagatttatggctggaccctctatga
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