Trachemys scripta elegans (red-eared slider): 117872910
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Entry
117872910 CDS
T07347
Symbol
TGFA
Name
(RefSeq) protransforming growth factor alpha isoform X1
KO
K08774
transforming growth factor, alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04012
ErbB signaling pathway
tst04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117872910 (TGFA)
04012 ErbB signaling pathway
117872910 (TGFA)
04020 Calcium signaling pathway
117872910 (TGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117872910 (TGFA)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117872910 (TGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C8A_B_C6_EGF-like
Trp_oprn_chp
TMEM154
Motif
Other DBs
NCBI-GeneID:
117872910
NCBI-ProteinID:
XP_034617653
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All DBs
Position
2:complement(145434529..145479702)
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AA seq
189 aa
AA seq
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MVSSAGETAVVALGILLAVCHALENTTSALSGPPVAAAVRSHFNDCPDSHSQFCFHGTCR
FLVQEEKPACVCHSGFVGTRCEHADLLAVVAANQKKQTITALVVVSVVASVILIVACVLI
HCCQIRKHCEWCRAFICRHKKPSGLLKGGTSCCHSETGRRNNCRTNGFLLIVSLAGRGDG
DPVKELSSV
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggtcagctccgccggggagactgcagtggtcgctctgggtattttactagctgtgtgc
catgccttggagaacacaacatctgccttgagtggtcccccagtggctgccgcagtccga
tcccattttaacgactgtcccgactcccacagtcagttctgcttccacgggacgtgcagg
tttctggtgcaagaggagaagccagcatgtgtctgccattctgggttcgtcgggacacga
tgcgaacacgcagacctccttgcagtggtagctgccaatcagaagaaacaaaccatcact
gccttagtggtggtttcagtggtagcgtccgtcatccttattgtggcttgtgtactaata
cactgctgtcagataagaaaacattgtgagtggtgccgagccttcatctgcagacacaag
aagcccagcgggctcctgaaggggggaacttcctgttgccattcagagacaggtaggagg
aacaattgtcgtaccaacggcttccttctaatagtttcattggctggccgtggagatggt
gatcctgttaaggagctgagttccgtttag
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integrated database retrieval system
