Trachemys scripta elegans (red-eared slider): 117878766
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Entry
117878766 CDS
T07347
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03022
Basal transcription factors
tst03420
Nucleotide excision repair
tst04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117878766 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
117878766 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117878766 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tst01001
]
117878766 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117878766 (CDK7)
03019 Messenger RNA biogenesis [BR:
tst03019
]
117878766 (CDK7)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117878766 (CDK7)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
117878766 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
117878766 (CDK7)
Protein kinases [BR:
tst01001
]
Serine/threonine kinases: CMGC group
CDK family
117878766 (CDK7)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117878766 (CDK7)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
117878766 (CDK7)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117878766 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
Seadorna_VP7
ABC1
Haspin_kinase
FTA2
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
117878766
NCBI-ProteinID:
XP_034629094
LinkDB
All DBs
Position
6:40473630..40512792
Genome browser
AA seq
343 aa
AA seq
DB search
MDARARAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDSSLVLTQSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTKIFETLGTPTEEQWPGMSS
LPDYVTFKSFPGMPLQHIFSAAGDDLLDLLQGLFIFNPCTRVTATQALKQKYFSNRPRPT
PGSQLPRPNCPAEALKEQQNSLLNLKRKRTEGIDQGLPKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgggcgcgagctaagcgctacgagaagctcgacttcctgggcgaggggcag
tttgccactgtttataaagcaagggataagaacaccaatcagattgttgctattaaaaag
attaaacttggacatagatcggaagctaaagatggaatcaacagaacagccctgagggag
ataaaattgttacaggagctaagccatccaaatatcattggtcttcttgatgcatttgga
cacaaatccaatattagtctggtctttgattttatggaaacagatctagaggttataata
aaggatagtagtcttgtgctgacacaatctcacatcaaagcatatatgttgatgacactt
caaggactggaatatttacatcagcactggattctgcacagggatctcaaaccaaacaat
ttgttactagatgaaaatggggttctaaaattggctgactttggcttggcaaaatctttt
ggaagcccaaatagagtctatacacaccaggtagtaacaagatggtatcgagcacctgag
ctactgtttggtgctagaatgtatggtgtaggtgtagatatgtgggctgttggctgtatc
ttagcagaactgcttcttagggttccttttttgccaggagactctgatcttgatcagctg
acaaaaatatttgaaacgctggggactccaacagaagaacagtggcctggcatgtctagt
cttccagattatgtaacatttaaaagtttccctggaatgccacttcaacatatcttcagt
gcagctggtgatgacttgctagatcttctccaaggtctattcatatttaatccttgtact
agggtcacagctacacaggcattgaaacagaagtattttagtaatcgaccaagaccaaca
ccaggaagtcaattgccaagaccaaactgtcctgcagaagccttaaaagaacaacaaaat
tcacttttaaatttaaaaaggaagagaacagaaggaatagatcaaggattaccaaaaaag
ttgattttttga
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integrated database retrieval system
