Trachemys scripta elegans (red-eared slider): 117878833
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Entry
117878833 CDS
T07347
Symbol
FXN
Name
(RefSeq) frataxin, mitochondrial isoform X1
KO
K19054
frataxin [EC:
1.16.3.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
117878833 (FXN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tst03029
]
117878833 (FXN)
Enzymes [BR:
tst01000
]
1. Oxidoreductases
1.16 Oxidizing metal ions
1.16.3 With oxygen as acceptor
1.16.3.1 ferroxidase
117878833 (FXN)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
117878833 (FXN)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Frataxin_Cyay
ORF_12_N
Motif
Other DBs
NCBI-GeneID:
117878833
NCBI-ProteinID:
XP_034629292
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All DBs
Position
6:90979583..90992531
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AA seq
190 aa
AA seq
DB search
MWRPGPARAAVRGLREAAGLRGALGGPATSCRQPDSHLQQLDHVLKVKNRSVQFINLRNA
GTLNDKSSLDEITYEKLAEETLDSLADFFEDLADKPFTPEDYDVSFGNGVLTAKLGGDMG
TYVINRQTPNKQIWLSSPTSGPKRYDWTGRKWVYSHDGVSLHELLAVELSAALKTKIDLS
PLVYSGKGDT
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtggaggccggggccggcgcgcgctgcggtccggggcctgcgcgaggccgcggggctc
cggggggcgctcgggggacccgccacctcctgccgccagcccgattctcatctgcaacaa
ttagaccatgttctaaaggttaaaaacagaagtgttcagtttattaatttaagaaatgca
ggaactttgaatgacaaaagttctttagatgagattacttacgaaaaacttgctgaagaa
acactggactcattagcagacttcttcgaggatctagcagacaagccttttacacctgaa
gattatgatgtctcctttgggaatggagttttaacagctaaactaggtggagacatggga
acctatgtaatcaacaggcagacaccgaacaagcagatttggctgtcctctcctactagt
gggcccaaacgttacgactggactggaagaaagtgggtgtattctcatgatggagtatcc
cttcatgaattactagcagtggaactctcagcggcactgaaaactaaaatagacttatct
cccttagtatactctggaaaaggtgatacttga
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