Trachemys scripta elegans (red-eared slider): 117879169
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Entry
117879169 CDS
T07347
Symbol
APC
Name
(RefSeq) adenomatous polyposis coli protein
KO
K02085
adenomatosis polyposis coli protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04310
Wnt signaling pathway
tst04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117879169 (APC)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117879169 (APC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117879169 (APC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117879169 (APC)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117879169 (APC)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117879169 (APC)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
117879169 (APC)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
117879169 (APC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_u14
APC_u9
APC_rep
APC_u15
APC_N_CC
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
117879169
NCBI-ProteinID:
XP_034630055
LinkDB
All DBs
Position
6:67196731..67359185
Genome browser
AA seq
2839 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEDEAM
ASSGQIDLLERLKELNLDSGNFPGVKLRPKMSLRSYGSREGSVSSRSGECSPVPMGSFPR
RGFMNGSRESTGYLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSL
QTDMTRRQLEYEARQIRAAMEEQLGTCQDMEKRAQVRVARIQQIEKDILRIRQLLQSQAA
EAERAPQSKHDSGSHEAERQNEGQGAAEISMATTGSGQGSTARMDHETASVMSTYSVPRR
LTSHLGTKVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGCLPLLIQLLHGN
DKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAYCETCWEW
QEAHEQGMDQDKNPRPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDC
EMYGLTNDHYSVTLRRYAGMALTNLTFGDVANKVGGCMRALVAQLKSESEDLQQVIASVL
RNLSWRADVNSKKTLREVGSVKALMECALDVKKESTLKSVLSALWNLSAHCTENKADICA
VDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENSCLQTLLQH
LKSHSLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRN
LMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKTSHRNK
QRHKQNLYSEYVLDSSRHDDGICRAESFNTSNVTVLSPYLNTTLLPGSSSSNRGNIENSR
SEKDRSVDRERTMGLGSYHPATENAGNASKRIGMQISTAAAQIAKVMEEVTNMHIPQEDR
SSGSTAEIHCLTEDRNALRRTSTAHAHSNTYNFPKSDNSNRACPVPYAKMEYKRASNDSL
NSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIHSANHMDDNDGELDTP
INYSLKYSDEQLNSGRQSPSQNERWARPKHIIEDEIKQNEQRQSRSQSTTYSGYTEGGGD
DHMKYQSPFGQQDPFRSRGSNSSEQNRIGTTHGMNQKVNQSLCQVDDYDDDKPTNYSERY
SEEEQHEDEEDRPTNYSIKYNEEEHHVDQPIDYSLKYSTEVPPSSQKPSFSFSKSSSVQS
TKTDLISSSSGNTSAPSASSKRQNQLHPSAAQRGGHVQKPVSCKTPSINQETIQTYCVED
TPICFSRCSSLSSLSSAEDEIGRDQATRVTDASNTLQIAELKDNSVTLSTEGAVSEVPST
SQHIRTKSNRLQASSLSPSDSSRHKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFS
RCTSVSSLDSFESRSIASSVQSEPCSGMVSGIISPSDLPDSPGQTMPPSRSKTPPPAQAV
PVKRETAKGKVPNVEKRESGSRQAAVNAAVQRVQVLPDADTLLHFATESTPDGFSCSSSL
SALSLDEPFIQKDVELRIMPPVHENDHGNETDSEQPEDAKDNQEKKAEKSTETEKDILDD
SDDDDDIEILEECIISAMPTKSSRKAKKLSQTTASKIPPPVARKPSHLPVYKLLPSQNRL
QSQKHVSFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPNELANVENVGTRAESGEF
EKRDTIPTEGRSTDDAQRGKDSTVSTSGLDDDKTEEGDILAECINSAMPKGKSHKPFRVK
KIMDQIQQASASSSVSGKNQPEGEKKKLTSPVKPMPQSNEYRPRLRKNTEPKSNFSNERA
YSDNKDTKKQNFKNSSRDFNDKLPNNEERVRGSFAFDSPHHYTPIEGTPYCFSRNDSLSS
LDFDDDDVDLSREKAELRKGKETKETETKACTDTEQTSNQQSTSRTQGQKHPTGRSHPKT
LMQKQTPFPEPSKDIPDRGAAIDEKMQNFAIENTPVCFSRNSSLSSLSDIDQENNNKEEG
EPTKRTEPPDSQIESSRPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECIS
SAMPKKKKPSRVKSESEKNSSRNMGGILAEDLTLDLREIQRPDSEHGFSPDSENFDWKAI
QEGANSIVSSLHQAAAASLSRQASSDSDSILSLKSGISLGSPFHLTPDQEEKSFTGNKGP
RIIKPGEKSTLETKKVESENKGIKGGKKVYKSMITGKVRSNSEVSSQLKQPQQTNMPSIS
RGRTMIHIPGVRNSSSSTSPVSKKGPPLKNTASKSPNEGQSSTSSPRGAKSSVKSEPSPI
TRQPSQQGGSSKGPSRSGSRDSTPSRPQQQPLSRPLQSPGRSSISPGRNGISPPNKLSQL
PRTSSPSTASTKSSGSGRMSYTSPGRQMSQQNLAKQTGLPKSASGIPRSESASKGLNQIL
NSSGSNKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKETPSPTLRRKLEESASFESL
SPSRPDSPTRSQIQTPVLSPSLPDMSLTSHSTVQASGWRKLPPNLNPSVEYNDGRPAKRH
DIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESSEKAKS
EDEKQHGSSFSGHIQTKESQVPAKGTWRKIKENEIPQIMSNPSHNSSSDATNGADSKTLI
YQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDSVLEKGNVNGKDSKDIQGKQ
NAGNGNGPVRTMGLENRLNSFIQIDSPDKKGTETKPVLSNPVPASETNESIINERTPFSS
SSSSKHSSPSGAVAARVTPFNYNPSPRKSSADNSSARPSQIPTPVNNSTKKRDSKTENTD
SSGTQSPKRHSGSYLVTSV
NT seq
8520 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcttcatatgatcagttgttaaagcaagttgaggcgctaaagatggagaac
tcaaaccttcgacaagaactagaggacaactcaaatcatcttacaaaactggaaactgag
gcatctaatatgaaggaggtgctgaaacagctacaaggaagcattgaagatgaggcaatg
gcttcctctggacagattgatttgttggagcgacttaaagaactgaacttggatagtggt
aactttcctggagtgaagctaaggccaaagatgtccttgcgttcatatggaagcagggaa
gggtccgtgtcaagccgttcaggagagtgcagccctgtacccatgggatcatttccaaga
agagggtttatgaacggaagcagagagagcacaggttatttagaagaactagagaaagaa
agatctctattgctggctgagcttgaaaaggaagagaaagaaaaggactggtattatgct
cagcttcagaacctgactaagaggatagatagtctccctcttactgagaatttctctttg
caaacagacatgacgagaaggcaattagaatatgaggcgaggcaaatcagagctgccatg
gaagaacaattaggtacttgtcaggacatggagaagcgggcacaggtaagggtggcaaga
attcagcaaatagagaaggacatacttcgtatacgacagctcttgcagtcacaagctgct
gaagcagagagggcacctcaaagtaagcatgattcaggctcacatgaagcagagaggcag
aatgaaggtcaaggagcagcagaaatcagcatggcaactactggtagtggtcagggttca
actgctcgaatggaccatgaaacagccagtgttatgagtacctattctgttcctcgaaga
ctgacaagtcatctgggtaccaaggtggaaatggtgtattctttgttgtcaatgcttggt
actcatgataaggatgacatgtcacgaactttgctagctatgtctagctcccaagacagc
tgcatagccatgcgtcagtctggatgtcttcctctcctcatccagcttttacatggcaac
gataaagactctgtgttattaggaaactctcggggcagtaaggaggcccgtgccagagcc
agtgcagcactgcataacatcattcactcacagcctgatgataagcgaggcagacgggaa
atccgtgtactccatcttttggaacagatccgagcttactgtgaaacatgttgggaatgg
caggaggcacatgaacaaggcatggaccaagacaaaaatccaaggccagctccagttgaa
catcagatctgtcctgcagtgtgtgttctgatgaaactttcatttgatgaagaacacagg
catgcgatgaatgagcttgggggtttgcaggctattgcagaactgttgcaagtggattgt
gaaatgtatgggcttacaaatgaccactacagtgttacattaaggcggtatgctggaatg
gcgctaacaaatttgacatttggagatgtggcaaacaaggtaggtggctgcatgagagcg
cttgttgcccaattaaaatctgaaagtgaagacttgcagcaggttattgcaagtgttttg
aggaatttgtcctggagagcagatgtaaacagtaaaaagactttgcgtgaagttggaagt
gtgaaagcattgatggaatgtgctttggacgttaaaaaggaatccaccctaaaaagtgtg
ttgagtgccttatggaatttgtcagctcattgcactgagaataaagctgatatatgtgct
gtggatggtgctcttgcctttttagttggcacattgacttaccgaagccaaacaaatact
ttagccatcattgaaagtggaggaggaatactacggaatgtttctagcttgattgctaca
aatgaggaccacaggcaaatcttgagagagaacagctgcttacaaacgttgttacagcat
ttgaagtctcacagcttgacaatagtcagtaatgcatgtgggaccctgtggaacctctct
gcacgaaatgcaaaggaccaggaagcattgtgggatatgggagcagttagcatgctcaaa
aacctcattcattcaaagcacaaaatgatagctatgggcagtgctgcagctttaaggaac
ctgatggcaaataggcctgcaaagtataaggatgccaatattatgtctccaggttcaagc
ttaccctctcttcatgttagaaagcaaaaggcattggaagcagagttagatgctcagcat
ttgtctgagacttttgacaacattgataatttgagccccaaaacatctcaccgtaataag
cagagacataagcaaaatttgtatagtgaatatgttttggattctagtcgacatgatgat
ggaatttgcagggccgagagttttaatacaagtaacgtgactgtactttcgccatattta
aatactacactgttgcctggctcctcttcatcgaatagaggaaatatagaaaactctcga
tctgaaaaggacagaagtgtggacagagagagaacaatgggattaggcagctatcaccca
gctacagaaaatgctgggaacgcctctaagcgaataggaatgcagatctctactgctgca
gctcagattgccaaagtaatggaagaagtaacgaatatgcatattccacaagaagacaga
agttctggatccacagctgaaattcactgcttgacagaagacaggaatgcattaagaaga
acatccactgcccatgcccattcaaacacttataactttcctaaatctgataattcaaac
cgggcatgtcctgtgccttatgcaaaaatggaatataagagagcttcaaatgacagctta
aatagcgtcagtagtagtgatggctatggtaaaagaggtcaaatgaaaccttccattgag
tcttactctgaagatgatgaaagtaaattttgcagttatggacaatatccagctgattta
gctcacaagatacatagcgcaaatcatatggatgacaatgatggagaactggacactcca
atcaattacagtcttaaatattcagatgaacagttgaattctggaaggcaaagcccctca
cagaatgaaagatgggcaagacctaaacatataatagaagatgaaatcaaacaaaatgaa
caaaggcagtcaagaagtcaaagtacaacctattctggatatactgaaggtggtggtgat
gatcacatgaaataccagtcaccttttggccagcaagatcctttcagatcaagaggatcc
aacagttcagaacaaaacagaataggcactactcatggaatgaatcagaaagtaaaccag
tccttgtgccaggttgatgattacgatgatgataagccaaccaactacagtgagcgttac
tcggaggaggaacaacatgaagatgaagaagacagaccaactaattacagtataaagtac
aatgaagaggagcaccatgtagatcaacctattgattatagtctgaaatactcaacagaa
gttcctccctcttctcagaagccatctttttctttttcaaagagttcatcagtacaaagc
actaaaactgatctcatctcatcaagtagtggaaacacatcagccccttcagctagctca
aagagacagaaccaacttcatccaagtgctgcacagagagggggtcatgttcagaagcct
gtctcctgtaagactccctccatcaaccaggaaactatacagacttattgtgtggaagat
acaccaatatgtttttcaagatgtagctctttgtcatctttgtcctcggctgaagatgaa
atagggcgtgatcaagccacccgtgtaacagatgccagtaacactctgcagatagcagaa
ctgaaagacaatagtgtgactctgtcaactgaaggtgcagttagtgaagtcccatcaaca
tcacaacatattagaacaaaatctaatagacttcaagcttccagtttatctccttctgat
tcatctagacataaagctgttgaattttcttcaggtgccaaatctccttcaaaaagcggt
gctcagactcctaaaagtccaccagaacattacgtacaggagactccactcatgtttagc
agatgtacttctgtaagttccttggatagttttgaaagtcgttccattgctagctctgtt
caaagtgagccttgcagtggaatggtaagtggtattataagccccagtgatcttccagat
agccctggacaaacaatgccgccaagtagaagtaaaaccccaccccctgctcaagcagtt
ccagtaaagagagaaacagctaaaggtaaagtacctaatgttgaaaagagagagtctggt
tctagacaagcagctgtaaacgcagctgttcaaagagttcaggtattgccagatgctgat
acattgttacattttgctacagaaagtacaccagatggattttcttgttcctccagccta
agcgctctgagtcttgatgaaccatttatacagaaagatgtagaattaagaataatgcct
cctgttcatgaaaatgaccatggaaatgaaacagactctgaacagccagaagatgcaaag
gataaccaagagaagaaagcagagaagtctactgaaacagaaaaggatatactagatgat
tctgatgatgatgatgatattgaaatattagaagaatgtattatttctgctatgccaaca
aaatcttcacgcaaagccaaaaagctttctcaaacaactgcttcaaaaatacctcctcct
gtagccaggaagccaagccatttgccagtatacaaactcctcccttcacaaaatagattg
cagtctcaaaagcatgttagttttacacctggagatgatatgccacgtgtgtattgtgtt
gaaggtacaccaataaatttttcaacagctacatctctgagtgacctcacaatagaatca
ccaccaaatgagttggccaatgtggagaatgtgggtacaagggcagaatcaggtgaattt
gaaaagagagataccattcctaccgaaggtagaagtacagatgatgctcaaagagggaaa
gactcaactgtgtctacctcaggattggatgatgacaaaacagaagaaggtgacattctt
gcagagtgcattaactctgctatgccaaaaggaaaaagccacaagcctttcagggtaaaa
aagataatggatcagattcaacaagcatcagcatcttcatctgtaagtggtaaaaatcaa
ccagaaggtgagaaaaagaagctaacatctccagtaaagcctatgccccaaagtaatgag
tacagaccacgcttaagaaaaaacacagagccaaaaagtaattttagtaatgaaagagcc
tattcagacaacaaagatacaaagaaacagaacttcaaaaatagctcaagagactttaat
gataaacttccaaataatgaggaacgtgtaagaggaagctttgcatttgattcccctcat
cattacacacctattgaggggactccttattgtttttcacggaatgactcactaagttca
ctagactttgatgatgatgatgttgacctttctagggagaaggctgaattaagaaaagga
aaagaaactaaggaaacagaaaccaaagcttgcactgatacagaacagacttcaaatcag
cagtcaactagtaggacacaaggtcaaaaacatccaacaggcagaagtcatcctaaaact
ttgatgcagaagcaaacccctttcccagaaccatccaaagatatcccggacagaggtgca
gctatagatgagaaaatgcagaattttgctatcgaaaatacccccgtttgtttttctcgc
aattcatctttgagttctctcagtgatattgatcaagaaaacaacaacaaagaagaaggt
gaacctacaaaacgaactgaacctcctgattcacagatagaatcaagtagaccacaggct
tctggttacgcacccaaatcatttcatgttgaagatacacctgtgtgtttttctagaaac
agttctcttagttctcttagtattgactcagaagatgaccttttgcaggaatgcattagt
tctgccatgcctaaaaagaaaaagccctcaagagtcaagagtgaaagtgaaaagaatagt
tccagaaacatgggtggtatattggcagaagacctgacactagatttgagagagatacag
aggcctgattcagagcatggtttctcacctgattcagaaaactttgattggaaagctatt
caagaaggtgcaaattctatagttagcagcttacaccaagctgctgctgcttcactgtct
agacaagcttcatcagactctgattccattctttcactaaaatctggaatttctttaggg
tcaccatttcatcttactccagaccaagaagaaaaatcctttactggtaataaaggtcca
agaattattaagccaggggagaaaagtacattggaaactaaaaaagtagagtcagaaaat
aaaggaatcaaaggaggaaagaaagtgtataaaagtatgattacaggaaaagttcgctct
aattcagaagtttcaagccagttgaagcagccccagcaaacaaatatgccttcaatctca
cgaggtaggacaatgattcacattccaggagttcgaaatagctcttccagtacaagtcca
gtttcaaaaaaagggcccccactcaagaacacagcctccaaaagtcccaatgaaggccag
agttccactagttccccgagaggagccaaatcatcagtgaaatcagagccaagtcctata
accaggcagccatctcaacagggtgggtcaagtaaaggaccttctaggtcaggatctaga
gattccactccttctagacctcaacagcagccattaagcagacctctgcagtctccaggt
cgaagctccatttccccaggcagaaatggtataagccctcctaacaaactatctcagctg
ccaaggacttcatctcctagtacagcttcaactaagtcctcaggttcaggacgaatgtca
tacacatcaccaggcagacagatgagccagcaaaaccttgcaaaacaaacagggttaccc
aaaagtgccagtggtattcccagaagtgagtctgcctcaaaaggtttgaaccaaattctt
aatagtagtggctcaaacaaaaaggttgaactatctagaatgtcatccacaaaatccagt
ggaagtgaatctgacagatcagagagacctgttctagtgcgccagtcaacttttattaaa
gaaactccaagtccaactctacgaagaaaattagaagagtctgcttcatttgaatctttg
tctccttctagacccgattctcccacccgatcccaaatacagaccccagttttaagtcca
tcacttcctgatatgtccttaacttctcattcaactgtacaggctagtggttggcgaaaa
ttacctcctaatcttaatccttctgtagaatataatgatgggagaccagcaaaacgtcat
gatatagctcgctctcattctgagagtccatctagactgccaatcaatagatcaggaaca
tggaagcgtgagcacagtaagcattcttcatcacttcctcgtgttagcacttggcgtaga
actggaagttcttcttcaattctatctgcgtcttcagaatctagtgaaaaggcaaaaagt
gaagatgaaaagcaacatggaagttctttttctggacacatacaaactaaagaaagtcaa
gtaccagcaaaagggacttggagaaagataaaggaaaatgaaattcctcaaataatgagt
aatccttctcataattcctcttcagatgctacaaatggtgctgattcaaaaactttaatt
taccagatggcacctgctgtttctaagactgaggatgtgtgggtgaggattgaggactgc
cctattaataatcctagatctggccgatcacctactggaaatactcccccagttattgac
agtgttttagagaaggggaatgtgaatggtaaagattctaaagatattcagggaaaacaa
aatgcagggaatggaaatggtcctgttcgcacaatgggtttagaaaatcgcctgaattca
ttcattcagatagacagtccagataagaagggaactgaaacaaaacctgtgctgagtaat
cctgttcctgcatcagagaccaatgaaagcattattaatgaacgtacaccattcagttcc
agcagctcaagcaaacacagttcacctagtggagctgttgcagcaagagtgactcctttc
aactacaatccaagtccacgaaagagtagtgcggacaacagttctgctcggccatcacag
ataccaacaccagtaaataacagcacaaagaaacgagattcaaagactgaaaatacagac
tctagtggaactcaaagtcctaaacgtcattctgggtcttacctggttacttctgtttaa
DBGET
integrated database retrieval system
