Trachemys scripta elegans (red-eared slider): 117879736
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Entry
117879736 CDS
T07347
Symbol
LAMB2
Name
(RefSeq) laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117879736 (LAMB2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117879736 (LAMB2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
117879736
NCBI-ProteinID:
XP_034630875
LinkDB
All DBs
Position
7:1137862..1229368
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AA seq
1772 aa
AA seq
DB search
MELLFALLLLVQVPGAGSQDVPGCSAGSCHPATGNLLIGRAQNLSATSTCGLQGPQEYCI
VSHLQDSEKCFSCDSRSPSLRNSHRIQNVVYLGGRDGHTTWWQSENGVEHVTIRLDLEAE
FHFTHLIMTFKTFRPAAMLVERSADFGRTWQVYRYFAYDCASAFPSAAPAPLRRVDDVIC
ESRYSDIEPSSEGEVIYRVLDPAIPIRDPYSPAIQDLLRVTNLRVNLTRLHTLGDNLLDS
RREIQEKYYYALYELVLRGSCFCYGHASECAPAPGAQANVEGMVHGRCACKHNTQGLNCE
KCDSFYNDLPWRPAEGRSTNACKRCNCNQHSRRCHFDMAVYLATGNTSGGVCDDCQHNTM
GRSCQLCKPFYYRDPSRDLRDPGACRACDCDPVGALDGGICDAHDDPALGLLAGQCRCKE
HTRGPRCDQCQPGFFGLSGDNPQGCQRCQCHPQGTVSDGTQCDPVSGNCFCKRLVTGRSC
DQCLPEHWALSHDLLGCRSCDCDVGGAHNNQCAAETGQCHCRSHMVGRTCSQVEPGFYLS
RLDHCTYEAEEARLRQGVVVERAQPTDRPATWTGAGFAHVPEGGAVEFLISDVPASMEYD
VVIRYEPQLPEPWEEVKLWVLRPGPIPTGSPCGNTIPADDRLATALPPRARYVLLPQPVC
LERGVRYTLRLELTRYTSRQAVPGASVLLDSLVLVPRYSSMEMFIAGDAGAMGRREAFER
YRCDQHAWAVGKAPTSDVCTSLLTSMSAIIHGGALPCLCDPQGSLSAECEPNGGQCQCKA
SVTGRRCHHCSPGTFGFGPSGCRACQCNSDGALSSFCDSFSGQCPCRPGAFGPRCDRCQP
GSWGFPHCQPCQCNGHSEECDPRTGSCLHCRDHTDGDRCQRCAAGHYGNPTLASGERCRP
CPCPDGPGSTRHFAASCRQDSRSRQVICNCNPGYTGLRCEECAPGHYGNPSQAGGRCQPC
QCNGNIDLLDAAACERRSGRCLRCLHHTEGEHCQHCQAGYYGDATRHSCRRCSCNVLGTE
RSKCSAQDECQCDRRSGQCQCLPSVQGQSCDRCAPNFWNLASGKGCEPCACHPQHSLGPA
CNQFTGQCPCQPGFGGRTCADCQENHWGEPSLQCRACDCDARGVESSQCHRATGHCSCRQ
GVSGVRCDQCARGFSGAFPDCQPCHQCFGDWDRVVQDLAARIRGLALRAKHIQQTGVAGA
FERNFRQLEEKLGTARAIVDARNATAAAMTQLLRTMEELRQHIGEATETLTQLEGELTTA
QDENYNAKRALGTLDRGARGLNLTLHDLARQLHLLKNSNFLGAYDSIRQSHAQSRAAAHD
ANASSLAVPSAVSDSAATRRRSEQLMARRRDDFNRQSAANRRALSELATRAQTLQLREIN
EKVCGAPGDAPCASSPCGGAGCRDEDGRRHCGGLNCQGAVAMASNARERARHAQAELHRA
MGEVEELFHKVAEAKGKADAARLRAQAALDKANETRARVERSNMALRELIHQIKSFLSQE
GADPDSIEVVAGRVLALSIPASPDQIRHLAEDIKERVSSLANVDAILEQTAGNVRRAEQL
LQDARRARSRAESVKNAAEVGRRALEDARRAQSAAESAIRSASNDIRHTQGTLSTIQLQA
ASTERQLQGAMEQVERLDSQLGALKMKRANNSLVATRAQDTANTAHARAGEVKQLAEGRL
EAEYQAAQELVQSQARGTLQARHRAEWLRDEAKALLRDAQGKLQHLTALEGSYQENERVL
EEKAAQLDGLEAKVKSIVGAINQQIQIYNTCQ
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgtttgctctcctgctgctggtccaggtgcccggtgcggggagccaggac
gtgcccggctgctccgcggggagctgccacccggccaccgggaacctgctgatcgggcgg
gcccagaacctgagtgccacgtccacctgtggactgcaggggccccaggaatactgcatc
gtcagccacctgcaggactcggagaaatgcttctcctgcgactcccggtccccgtctctg
cgcaacagccaccgcatccagaacgtggtgtacctcggcggccgggatggccacaccacc
tggtggcagtcagagaatggcgtggagcacgtcaccatccgcctggacctggaggccgag
ttccacttcacccacctcatcatgaccttcaagaccttccgcccggcggccatgctggtc
gagcgctcggcggatttcggccgcacctggcaggtttatcgctacttcgcctatgactgc
gcctcggccttccccagtgctgcccccgcgcccctgcgcagggtggacgatgtcatctgc
gagtcccgctactcggacatcgagccgtccagcgagggggaggtcatctaccgagtcctg
gacccagccatccccatccgagacccctacagcccggccatccaggatctgctgcgcgtc
accaacctgcgggtgaacctgacccggctgcacacgctgggcgacaacctgctggactcg
cggcgggagatccaggagaagtattactacgccctctacgagctggtgctgcgcgggagc
tgcttctgctacggccacgcctccgagtgcgcgcccgcccccggcgcccaggccaacgtg
gagggcatggtgcatggcaggtgtgcctgcaaacacaacacgcagggcctgaactgcgag
aagtgcgacagcttctacaatgacctaccctggcgcccagccgaggggcgcagcaccaat
gcctgcaagaggtgtaactgtaaccagcactcgcgccggtgccacttcgacatggccgtg
tacctggccacgggcaacaccagcgggggcgtctgtgacgactgtcagcacaacaccatg
ggccgcagctgccagctctgcaaacccttctactacagggaccccagccgggacctgcgg
gaccccggggcctgccgagcctgtgactgtgacccagttggcgccctggacggtgggatc
tgcgatgcccacgacgacccggcgctggggctcctggccgggcagtgccgctgcaaggag
cacacgcggggcccacgctgcgaccagtgccagccggggttcttcgggctcagcggggac
aacccccagggctgccagcgctgccagtgccacccccaggggacagtgtcggatgggacc
cagtgcgaccccgtcagcggcaactgcttctgcaagcgcttggtgaccggccgaagctgt
gaccagtgcctgcccgagcactgggctctcagccacgacctgctcggctgccgctcgtgt
gactgcgacgtgggaggtgcccacaacaaccagtgcgccgccgagacggggcagtgccac
tgccgcagccacatggtgggccggacctgcagccaggtggagcccggcttctacctctcc
cgcctggaccactgcacctacgaggcggaggaggcccggctgcgccagggcgtggtggtg
gagcgggcgcagcccacggaccggccagccacgtggacgggggcagggtttgcccacgtg
ccagagggcggagccgtggagttcctgatcagcgatgtgcctgcctccatggagtacgac
gtggtgatccgctacgagccccagctcccggagccgtgggaggaggtgaagctgtgggta
ctgcgccccgggcccatccccaccggcagcccctgtgggaacaccatccctgctgacgac
cggctggccacggcgctgccgcccagggccaggtacgtgctcctgccccagcccgtctgc
ctggagcgcggcgtccgctacaccctgcgcctggagctcacccgctacacgtcccgccag
gcggtgcccggtgccagtgtcctgctcgactcgctggtgctggtgccgcgctattcctcc
atggagatgttcatcgcgggcgacgcaggcgccatggggcgcagggaggccttcgagcgg
taccgctgtgatcagcacgcctgggctgtgggcaaggcgcccaccagcgacgtgtgcacc
agcctgctcaccagcatgtcggccatcatccacgggggggcgctgccctgtctgtgcgac
ccccagggctcgctgagcgctgagtgcgagcccaacggggggcagtgccagtgcaaggcc
agcgtgacggggcgtcgctgccaccactgctccccgggcacctttggctttgggcccagc
ggatgccgagcctgccagtgcaacagtgacggggccctgagcagcttctgcgacagcttc
agtgggcagtgcccctgccggccgggcgcctttgggccccgctgcgaccgctgccagcct
ggctcctggggcttcccccactgccagccctgccagtgcaatgggcactcggaggagtgc
gacccacggaccggcagctgcctgcactgccgcgaccacacggatggcgacagatgccag
agatgcgcagctggccactacgggaaccccacactggcctcgggggagcgctgccggccc
tgcccctgccccgacgggcctggcagcacccgccacttcgccgcctcctgccgccaggac
agccgctcccgccaggtgatctgcaactgcaaccccggctacacaggtctgcgctgcgag
gagtgtgcccctgggcactacgggaacccctcgcaggccggcgggcgctgccagccctgc
cagtgcaacggcaacattgacctgctggacgcggcggcgtgtgagcggcgctcggggcgc
tgcctacgctgcctgcatcacacggagggggagcactgccagcactgccaggccggctac
tacggtgacgccacccgccacagctgccggcgctgctcctgtaacgtcctgggcacggag
cgcagcaagtgcagtgcacaggatgaatgccagtgtgatcggcgtagcgggcagtgccag
tgcttacccagcgtccaggggcagagctgtgaccgctgcgcccccaacttctggaacctg
gccagcgggaagggctgtgagccctgtgcctgccacccccagcactcgctgggcccagcc
tgcaaccagttcacagggcagtgcccgtgccagccgggcttcgggggccgcacctgcgcc
gactgccaggagaaccactggggcgagcccagtttgcagtgccgagcctgtgactgcgac
gcccgcggggtcgagagctcccagtgccaccgcgccaccgggcactgctcctgccgccag
ggggtgtcgggtgtccgctgcgaccagtgcgcccgcggcttttctggcgccttccccgac
tgccagccctgccaccagtgctttggggactgggaccgtgtggtgcaggacctggctgcc
cgcatccggggcctggcactgcgtgccaaacacatccagcagacgggcgtcgcaggcgcc
ttcgagaggaacttccgccagctggaggagaagctgggcacggcccgggccatcgtggac
gcccgcaacgccaccgcggcggctatgacccagctgctgcgcaccatggaggagctgcgg
cagcacatcggcgaagccacggagacgctgacccagctggagggcgagctcaccacggca
caggacgagaactacaacgccaagcgcgccctgggcaccctggaccgcggtgcccgtggc
ctcaacctcaccctgcacgacctggcacgccagctccacctgctcaagaactccaacttc
ctgggtgcctacgacagcatccgccagtcccacgcccagtcacgggcggctgcgcatgat
gccaatgcctccagcctggcggtgcccagcgctgtgagtgactccgcggccacccggcgc
cgctcggagcagctgatggcacggaggagagacgacttcaaccgccagagcgcggccaac
cggcgggcactgagcgagctggccaccagggcccagactctgcagctgcgggagatcaac
gagaaggtgtgtggtgcccccggggatgccccctgcgccagcagcccctgcgggggggcc
ggctgccgggacgaggacggcaggcgccactgcgggggcctcaactgccagggggcagtg
gccatggccagcaacgcgcgggagcgggcccggcacgcccaggccgagttgcaccgggcc
atgggtgaggtggaggagcttttccacaaggtggccgaggccaaggggaaggctgacgcg
gcccggctgagggcacaggcggcgctggacaaggccaatgagacccgggcgcgggtggag
cgctccaacatggctctgcgcgagctcatccaccagatcaagagcttcctgagccaggag
ggggccgaccctgacagcattgaggtggtggccgggcgggtgctggcgctttccatcccg
gcctcgcccgaccagatccgccacctggccgaggatatcaaggagcgggtcagcagcctg
gccaacgtggatgccatcctggagcagacggcaggcaatgtgcgccgggcggagcagctg
ctgcaggacgcccgcagggccaggtcccgggctgagagcgtgaagaacgcggctgaagtg
gggaggcgggcgctggaggatgccaggcgagcccagagcgccgccgagagcgccatccgc
agcgccagcaacgacatccgccacacgcagggcaccctgagcacgatccagctgcaggcg
gcgagcacagagcgccagctgcagggcgccatggagcaggtggagcggctggacagccag
ctgggtgcgctgaagatgaaacgagccaataacagcctggtggccactcgggcccaggac
acggccaacaccgcgcacgcccgggccggggaagtcaagcagctggcagaggggcggctg
gaggccgagtaccaggcggcgcaggagctggtgcagagccaggcgcgtggcacgctgcag
gccaggcaccgggcggagtggctgcgtgatgaggccaaggccctcctgcgggatgctcag
ggcaagctgcagcacctgacagcgctggaggggtcgtaccaggagaacgagcgggtgctg
gaggagaaggcagcccagctagacgggctagaggccaaggtgaaaagcattgtgggtgcc
atcaaccagcagatccagatctacaacacctgccagtga
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