Trachemys scripta elegans (red-eared slider): 117879804
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Entry
117879804 CDS
T07347
Symbol
RAF1
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04012
ErbB signaling pathway
tst04068
FoxO signaling pathway
tst04140
Autophagy - animal
tst04150
mTOR signaling pathway
tst04210
Apoptosis
tst04218
Cellular senescence
tst04270
Vascular smooth muscle contraction
tst04370
VEGF signaling pathway
tst04371
Apelin signaling pathway
tst04510
Focal adhesion
tst04540
Gap junction
tst04625
C-type lectin receptor signaling pathway
tst04810
Regulation of actin cytoskeleton
tst04910
Insulin signaling pathway
tst04912
GnRH signaling pathway
tst04914
Progesterone-mediated oocyte maturation
tst04916
Melanogenesis
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117879804 (RAF1)
04012 ErbB signaling pathway
117879804 (RAF1)
04370 VEGF signaling pathway
117879804 (RAF1)
04371 Apelin signaling pathway
117879804 (RAF1)
04068 FoxO signaling pathway
117879804 (RAF1)
04150 mTOR signaling pathway
117879804 (RAF1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117879804 (RAF1)
09143 Cell growth and death
04210 Apoptosis
117879804 (RAF1)
04218 Cellular senescence
117879804 (RAF1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117879804 (RAF1)
04540 Gap junction
117879804 (RAF1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117879804 (RAF1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117879804 (RAF1)
09152 Endocrine system
04910 Insulin signaling pathway
117879804 (RAF1)
04912 GnRH signaling pathway
117879804 (RAF1)
04914 Progesterone-mediated oocyte maturation
117879804 (RAF1)
04916 Melanogenesis
117879804 (RAF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
117879804 (RAF1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117879804 (RAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tst01001
]
117879804 (RAF1)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117879804 (RAF1)
Protein kinases [BR:
tst01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
117879804 (RAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
RBD
C1_1
Kinase-like
ABC1
zf-RING-like
Pkinase_fungal
SNX17-27-31_F1_FERM
C1_2
Motif
Other DBs
NCBI-GeneID:
117879804
NCBI-ProteinID:
XP_034631047
LinkDB
All DBs
Position
7:37324375..37406490
Genome browser
AA seq
667 aa
AA seq
DB search
MEHIQGAWKTISNGFGFKDSVFDGSNCISPTIVQPFGSQRRASDDGKLSDMSKTSNTIRV
FLPNKQRTVVNVRNGMTLHDCLMKALKVRGLQPECCAVFRLFNEQKGKKARLDWNTDAAS
LIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKV
PTMCVDWSNIRQLLLFPNSNISDSGVPALPPLTMRRMRESVSRMPVSSQHRYSTPHAFTF
NTSNPSSEGSLSQRQRSTSTPNVHMVSTTMPVDNRIIENNSLNASPSSWCRRFCLRGRDA
IRSHSESASPSALSGSPNNISPTGWSQSKTPVPAQRERAPGSNTQEKNKIRPRGQRDSSY
YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVNPTPEQFQAFRNEVAVLRKT
RHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH
AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPSGSILWMAPEVIRMQ
DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKA
MKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINRSASEPSLHRAAHTEDINSCTLT
STRLPVF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagcacattcagggagcttggaagaccatcagtaacggttttggattcaaggattct
gtctttgatggatcaaactgtatttcacctactattgttcagccgtttggctctcaacgc
cgagcttctgatgatggcaagctctcagatatgtctaagactagtaataccattcgggtt
ttcttgcctaataagcaacgcacagtggtaaatgtgcggaatgggatgaccctacatgat
tgtcttatgaaggcgctcaaagtcagaggtctgcagccagaatgctgtgcagtttttcga
ctttttaatgaacaaaaaggcaaaaaagcgcgcttggattggaatacagatgctgcttcc
ttgattggagaggaactgcaagtagatttccttgatcatgttccacttacaacacacaac
tttgctcggaagacatttctaaagcttgccttctgtgacatatgccagaagttcctgcta
aatgggttccggtgtcagacgtgtggctacaaattccatgaacactgcagcactaaagtc
ccaaccatgtgtgtggactggagcaatatcaggcaactcttattgttccctaattcaaat
atcagtgacagtggtgtccctgcactacctcccttgacaatgcgacggatgcgtgagtct
gtctcccggatgcctgttagttcccagcacagatattctacgcctcatgccttcacattc
aacacatcaaatccttcctctgagggctccctttcccaaagacagagatctacatccacc
ccaaatgtccatatggtcagcactaccatgcctgtagacaacaggataattgagaacaac
agcttgaatgcttctcccagttcctggtgcagacgattttgtttgaggggaagagatgca
attcgaagccacagtgagtcagcttcaccgtcagctctgtctggaagtcccaacaatata
agcccaactggctggtctcaatccaaaaccccagtgccagcccaaagagagagggctccc
ggatccaacacacaagaaaaaaacaaaattaggcctcgtggacagagagattcaagttat
tattgggaaatagaagcaagtgaagttatgctctcgaccagaatagggtcaggttctttt
ggaacggtttacaaaggcaaatggcatggagatgtagcagtaaagatattaaaggtggta
aatccaaccccagaacagtttcaggccttcagaaatgaagtggctgtattaaggaagacc
cggcatgttaatattttgctgttcatgggctacatgactaaagacaatctggctattgtt
acgcagtggtgcgaagggagcagtctgtataagcacctgcatgtacaagagaccaagttc
caaatgttccagctcattgatattgcccgacagacagcacaaggaatggactatttacat
gcaaagaatatcatccacagagacatgaaatcaaataatatatttcttcatgaaggcctc
acagtgaaaataggagattttggtctggcaacagtaaaatccagatggagtggatctcag
caggtggagcagccttctggttcaatcctctggatggcaccagaggtgatccggatgcag
gataataacccatttagttttcaatcagatgtctactcctatggaatagtattatatgaa
ctgatgacaggagaactgccatactcccatattaacaacagagatcagatcatttttatg
gttggtcgaggttatgcatctccagacctcagtaaactgtacaagaactgtcccaaagct
atgaagaggcttgtagcagattgtgtgaagaaagttaaggaggaaagacctctatttcca
cagatactgtcttccattgaattgctgcagcattctttacccaaaatcaaccgtagcgct
tctgaaccttctctgcatcgtgcagcccacacagaggacataaattcatgcacattaaca
tccacaagactacctgttttttag
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