Trachemys scripta elegans (red-eared slider): 117880296
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Entry
117880296 CDS
T07347
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03020
RNA polymerase
tst04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117880296 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117880296 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117880296 (POLR3A)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117880296 (POLR3A)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117880296 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Bac_DNA_binding
Motif
Other DBs
NCBI-GeneID:
117880296
NCBI-ProteinID:
XP_034632225
LinkDB
All DBs
Position
7:complement(66095384..66147176)
Genome browser
AA seq
1401 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNHHSPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCRILLSSE
ERKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKSTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPIVSSFLQSFETAIEHNKEVESLLGRAQENLTPLMVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANLNFMRKLVRNGPEVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCAVKANLRTKGKQYCGRGEDLCINDSYVTIQNSQLMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNDG
YKKCDEYIEALRTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHCKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCQNEPALSKNELVLTAESIMKKVEFLC
CRDSFLQALTETGYEKYNEEIKKFIKSVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAHLDKDDDSDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKIVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTTS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPRRPLIFDNEFHIPLIK
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagggagaccgacgtggccaagaaaataagccacatctgcttt
ggcatgaaatctccagaagagatgcgccagcaggctcacattcaggtggttagtaagaac
ttgtacagccaggacaaccaccactctccactgcagtatggagtactggaccatcgtatg
ggtaccagtgaaaaggaccgtccatgtgaaacctgtgggaagaatctagctgactgttta
gggcattatggctacattgacttggagctgccatgtttccatgttgggtactttaaagct
gtcataggcatcttacagatgatctgcaagacctgttgccgtatactgttgtcctcagag
gagagaaaacagtttttggattatctgaagaggcctggtctgacctacctgcagaaacgg
ggattgaaaaagaaagtctctgaaaagtgcagaaagaaaagcacctgcccttattgtggc
gctttcaatggtactgtaaagaagtgtggcttattgaagataatccatgagaagtacaag
accaataagaaagtggtggatccaatagtgtccagtttccttcagtcctttgaaactgcc
atagaacataacaaagaagtagaatccttgctggggagagctcaggagaatttgactcct
ttaatggtgttgaacctctttaaaagaatcccagcggaagatatacctctgcttctgatg
aatccagaagcaggaaagccttcagacttgatcctgacacgactcctggtacctccattg
tgcatcagaccctctgttgtgagcgacttgaagtctggcaccaacgaagatgacttgacg
atgaagcttacagagataattttcctcaatgatgtaatcaaaaagcataggatatcggga
gccaaaacacagatgataatggaagactgggacttcctgcagctgcagtgtgccctctac
attaacagtgagctctctggaattcctcttaacatggcacccaagaaatggactagaggt
tttgttcaaagactcaaagggaagcagggtcggtttagaggcaatctgtccggaaagcga
gtggacttctcaggcagaacagtcatttcacctgaccccaacttacgaatagacgaagtg
gctgtgcctgttcacgttgccaaaatattaacattccctgaaaaagtgaacaaagctaac
ctgaattttatgaggaaactcgtacggaatggtcccgaagttcaccctggagccaatttc
attcaacagaggcacacacaaatgaaaaggtttttgaaatatggaaaccgtgagaagatg
gctcaggagctcaagtatggtgacattgtagagaggcatctcatagatggggatatagtt
ctgttcaaccgacagccctctctgcacaagctgagtatcatggctcacatagcgagagta
aagccccacaggaccttcaggtttaatgaatgtgtctgtacaccatacaatgctgatttt
gatggagatgaaatgaatcttcatcttcctcaaacagaggaggccaaagcagaagcactg
attctcatggggaccaaagcgaacttggtaacaccaagaaatggagagcctttgattgct
gctattcaagattttcttacaggtgcctatcttctcacactaaaagacaccttttttgac
cgagccaaggcctgtcaaattattgcttctatcctggttggcaaggatgagaagattaaa
gttcgccttccaccaccagcaattctaaagcctgtaaccctgtggacaggaaagcaggtc
ttcagcctcattctcaaacctagcgatgactgtgctgtgaaagccaatctccgaaccaaa
ggaaaacagtactgtggcagaggggaggatctgtgtatcaatgattcttatgttacaatc
cagaatagccagttgatgagtggcagtatggacaaaggaaccttaggatctggatccaag
aacaatatcttttacattctgctgagagactgggggcaggtagaggctgcagatgctatg
tcacggctagccaggcttgctcctgtttacctctctaaccgtgggttctcaattgggatt
ggtgatgtaactccaggacagggactgctaaaggctaaatatgaacttctgaatgatggc
tataagaaatgtgatgaatacattgaagctttgcgcactggtaagctgcagcagcagcct
ggctgtaccgcagaagagacattagaggccttaatccttaaagaactctctgtgatcaga
gaccatgctggcagtgcctgtctcagagaactagataaaagtaacagtccccttattatg
gctctctgtggttctaaaggttcctttattaacatatcgcagatgattgcctgtgtagga
cagcaggctatcagtgggtcacgtgtgcctgatggatttgaaaataggtctctgcctcac
ttcgagaagcactgtaagcttccagctgcaaaaggttttgttgccaatagcttctattct
ggcttgactccgactgagttcttcttccatacgatggctggtcgagaaggtctagttgat
acagctgtaaaaacagctgaaactggatatatgcagagacggctggtgaaatctcttgaa
gatctttgctctcaatatgatctcactgtcagaagttctactggtgacattatacagttc
atttatgggggagatggcttagatcctgccgctatggaagggaaagacgaacctttggaa
ttcaagcgagtcctggacaacatcagagcagtatatccatgtcaaaatgaaccagctctt
agtaaaaatgaattggtgttaactgctgagtccatcatgaagaaagttgaattcctttgc
tgccgggacagtttcctacaggcattaactgagacaggttatgaaaagtataatgaggag
attaaaaaattcatcaaaagcgtttctgaaaagatcaagaaaaccagggacaagtatggt
attaacgacaatggcacaacagagccacgtgtcttgtaccaattggatcgaattacccca
acgcagctagagaagtttctagagacctgtagggacaaatacatgagggcacagatggag
cctggctctgcagtaggagctctgtgtgctcagagtattggtgagcctggcacacagatg
actctgaaaactttccactttgctggtgttgcctcgatgaacatcactctgggtgttcct
agaatcaaagaaattattaatgcctccaaagcaatcagcacacctattatcacagcacac
ttggacaaggatgatgattctgattttgcccgtctggttaagggaagaattgagaaaact
ctattaggagagatttcagagtacatcgaagaagtgtttcttcctgatgattgctttata
ctggtcaagctctctctggagcggattagactgctgagactagaggtgaatgcagagact
gtgcgatattctatctgcacatctaagctaagagtgaagcctggggatgttgccgttcat
ggagaggcagttgtctgtgtgacccctcgtgagaatagtaagagttcaatgtattatgtc
ttgcaatccctgaaagaagagctaccaaagattgtagtgcaaggtatcccagaggtgtct
cgagcggtcattcacattgatgagcagagtggcaaggagaaatacaaacttctggtggaa
ggtgataacctacgagctgtcatggccacccatggagtcaaaggaactaagaccacttct
aacaacacttatgaggtagagaaaacactagggattgaagctgctcgaacaaccattatc
aatgagattcagtacactatggtaaaccatggtatgagcattgacaggaggcatgttatg
ctgttatcagatctgatgacatacaagggtgaagtcctgggcattactaggtttgggctg
gcaaaaatgaaggaaagtgtgttaatgctggcttcttttgaaaagactgcagaccatctg
tttgatgctgcctactttgggcagaaggattctgtgtgtggtgtttctgagtgtatcatc
atgggaattccaatgaacattggaacaggactcttcaaactgctgcacaaagcagacaag
gagtcaacccctcctaggaggccccttatttttgataacgaatttcatattccacttatc
aaatag
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integrated database retrieval system
