KEGG   Trachemys scripta elegans (red-eared slider): 117880566
Entry
117880566         CDS       T07347                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03020  RNA polymerase
tst03420  Nucleotide excision repair
tst04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117880566 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117880566 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    117880566 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tst03021]
    117880566 (POLR2F)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117880566 (POLR2F)
Transcription machinery [BR:tst03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117880566 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     117880566 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     117880566 (POLR2F)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117880566 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 117880566
NCBI-ProteinID: XP_034632745
LinkDB
Position
1:complement(91741754..91748172)
AA seq 195 aa
MGTRSAVHFRLRQRRPRKWLLGGQLPRSWVACSVTTPRCWGSAVGIASRDCRAGPAACPT
TRTSEKEAGARVRPGFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERQQANQKRI
TTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPD
GSYEDWGVDELIITD
NT seq 588 nt   +upstreamnt  +downstreamnt
atgggaacccgctccgccgtccacttccgcttacgtcagcgtcgaccccggaagtggctg
cttggaggtcagctgccgcgctcgtgggttgcctgctctgtgacgactccccgctgctgg
gggtctgcggttggtatcgcgtcgcgagattgtcgcgccgggccggcagcatgtccgaca
acgaggacaagtgagaaggaggcgggggctcgtgtccggccgggctttgatggcgatgac
tttgacgatgtggaggaagatgaagggctagatgacttggagaacgcagaggaggagggt
caagagaatgtagaaatccttccatctggagagagacagcaggcaaatcagaagcggatc
acgactccatacatgaccaaatatgagcgagccagagtcctgggcactcgtgcactccag
atagcgatgtgtgctccagtcatggtagagttggaaggagagacagatcctctgctgatt
gcaatgaaagaactcaaagctcggaagattcccataatcatccgcaggtacctgccagat
ggaagctatgaagactggggtgtggatgagctaattatcacagactga

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