Trachemys scripta elegans (red-eared slider): 117884001
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Entry
117884001 CDS
T07347
Symbol
GRIN2A
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04020
Calcium signaling pathway
tst04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117884001 (GRIN2A)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117884001 (GRIN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117884001 (GRIN2A)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Glutamate (ionotropic)
117884001 (GRIN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117884001
NCBI-ProteinID:
XP_034639891
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All DBs
Position
10:23801586..24104309
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AA seq
1470 aa
AA seq
DB search
MWRENAGIKLAKMGKIGYALLVLQALLAQLDLVRGAEKSYPILNIAVILGRTKYITERDI
RALWSREMSADLAIDVNVVTLLVNQTDPKSIITHVCDLMSGTKIHGVIFGDDTDQEAIAQ
ILDFISSQTFIPILGIHGGSSMIMADKDVMSTFFQFGASIQQEAIVMLKVMQDYDWHVFS
LVTSTFPGYRDFISFIKTTVENSFVGWDMQNVIILDTAIGDAKTQIQLKKIHSSVILLYC
SKDEAVYILDEARSLGLTGYDFFWIVPSLVSGNTEITPKEFPSGLISASYDEWDYSLEAR
VRDALGIISTAASAMLEKYSFIPEAKTSCYGQLEKNERPSHTLHKFMMNVTWEGKDLSFT
EDGYQAHPKLVVIVLNKDRKWEKVGKWENKTLSLTYSVWPRFSSFADSDPDDNHLSIVTL
EEAPFVIVEDMDPLTETCVKNTVPCRKFVKINNSTNEGTNIKKCCKGFCIDILKKLSRTV
KFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVET
GISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAMAVFIFEYFSPVGYNRNLAKG
KAPHGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAA
FMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPDMHLYMTKYNQK
GVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPW
KRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALS
LITFVWEHLFYWKLRFCFTGVCTDRPGLLFSISRGIYSCIHGVHIEEKKKSPDFTLTSSQ
TNMLKLLRTAKNMTNINPSRINSPKRTGDFIQRGSLIMDMVMDKGNLIFSENRSFQPKDN
LFGDNMSELQTFVSNRHKDNLNNYVFQGQHPLTLNESNPNTVEVAVTAEAKVNSRPRQLW
KKSVESLRQESIRQSQGSQRENGSEENRQHSVKGQRYLPEEIVHSDVSETSSRTTCHMEP
ENNNKHHKTKDNVKKRSVVSKYPKDCSDVELTYLKAKQSTPRDKIYTIDADKQPGLHLNP
PPYIENIVLPETIEFPAAYQDHNDNYRKAEHGNRTPLHNEDSLPNNDQYKLYSKHYSLKD
KNASLVEVNDRYRQNSTHCRSCLSNLPSYTGHYSSRSPYKCDACLRMGNLYDIDEDQILQ
EAANSEHPEEMYEHDWVQNNAIQHQKKDKLRISRQHSFDNILDKCRDIDIGRPARSISLK
EKERFLDSSSYANTFHFPPSKLLSNKSSLVTQTLEDSKRSKSLYPDHSADNPFLHSYRDD
QHFVFGRSPADLYKQSLAAKARNDNYSKSSIKSTASYSSRDGRVHNDMYLSEHVMPYVAN
KNSVYSTPRVLNSCSNRRVYKKMPSIESDV
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggagaatgcagggataaagctggcaaagatggggaaaattggctatgctctc
ctggtactccaagctcttctggcgcaattggatcttgttcgaggagcagagaaaagttat
cccatactcaacattgcagtgattctggggaggaccaagtatatcacagagcgagacatc
cgagctctctggagcagggaaatgtcggcagacttggccattgatgtcaacgtagtgacc
cttttggtgaaccagactgaccctaaaagcattataacgcatgtttgtgacttgatgtca
ggcaccaagatccatggggtaatttttggagacgatactgatcaggaggcgatagctcag
attttggattttatttcatctcagacttttattccaattctgggaattcatggcggctcc
tccatgatcatggcagataaggatgtgatgtccacattcttccagtttggggcttctatc
cagcaggaagccattgtcatgctgaaagtgatgcaagattatgactggcatgttttttcc
ctggtgaccagcacctttcctggataccgggacttcataagtttcatcaagaccacagtg
gaaaacagttttgtgggctgggacatgcagaatgtgatcatacttgatactgccattggg
gatgccaagacccagattcagttgaagaaaattcattcatctgttatcctgctttattgt
tccaaggatgaagctgtttacattcttgatgaagcccgttccctaggccttacaggctat
gatttcttctggatagtccccagcctggttagtggcaacacagaaatcactcccaaggaa
tttccttcagggctaatttcagcatcctatgatgaatgggactatagtttagaagctcgg
gtgcgggatgctcttgggattatcagcacagctgcatcagccatgttggaaaagtactcc
ttcattccagaagcaaaaaccagctgctatggacaactagagaagaatgaacgaccatct
cacacgctacacaagtttatgatgaatgtgacttgggaaggtaaagatttgtccttcaca
gaagatggctaccaggcacacccaaagctggtggtgatagtgctgaacaaggaccggaag
tgggaaaaggtgggaaaatgggagaacaagactctgagcctgacgtattccgtatggcca
agatttagttctttcgcagacagtgaccctgatgacaaccacttgagtattgttaccctg
gaggaggccccctttgtcatcgttgaggatatggatcctttgacagaaacttgtgtaaaa
aacactgtgccatgccgtaaatttgtcaaaattaacaactcaactaatgaaggaactaac
ataaagaaatgttgcaagggattctgcattgacatcctgaagaagttatctagaactgtg
aagttcacgtatgacctatatctggtgaccaatgggaagcatggcaaaaaggtcaataat
gtgtggaatggaatgattggtgaagtggtctatcagagagcagttatggctgttggttct
cttacaattaatgaagagcgttcagaagtggttgacttctcagtgccatttgttgagact
gggataagtgtcatggtgtcaaggagcaatggcacggtgtctccatctgcatttctagag
ccttttagtgcttctgtctgggtgatgatgtttgtgatgcttctcattgtgtccgccatg
gctgtctttatatttgagtactttagtcctgtaggatataacaggaacttagcaaaaggg
aaagctccccacgggccatccttcaccattggaaaagcagtgtggttgctctggggcttg
gtgttcaacaactctgtgcctgttcaaaacccgaaagggacaaccagcaaaatcatggtg
tcagtttgggccttttttgctgtcattttcttggctagctacactgccaacctggctgca
tttatgattcaagaggaatttgttgaccaggtgactgggctaagtgataaaaagtttcag
aggccacatgattattcacccccctttcgatttggaaccgttccaaatgggagcacagag
agaaacatcagaaacaattacccagatatgcacctctatatgacaaagtataatcagaaa
ggcgttgaggatgcattggtcagcttgaaaactgggaagttggatgctttcatctatgat
gcagcagtgctgaattacaaggctggaagagatgagggctgcaaacttgtaacaataggc
agcggatacatctttgccactacgggctatggaatagctctccagaaagggtcaccttgg
aagagacagattgacctagcactccttcagtttgttggtgatggagagatggaagaattg
gaaacactgtggttgactggtatttgtcataatgaaaagaatgaagtcatgagcagccag
ctggatattgacaacatggcaggcgtattttacatgctcgcagcagctatggcactcagc
ctaataacctttgtctgggaacatttgttttactggaaactcagattctgcttcactggg
gtctgcacagataggccaggattgttgttctcaatcagtaggggtatttatagctgtatt
catggagtgcacattgaggaaaagaagaaatcacctgactttactttgaccagctcccaa
accaacatgttaaaactactgcgaacagccaaaaatatgaccaatattaatccttcaaga
attaattcccccaaaagaacaggtgattttattcaaaggggttcgctaattatggatatg
gtcatggataaagggaatttgatattctctgaaaacagatcctttcagccaaaggacaac
ctttttggtgacaatatgagtgaactgcaaacatttgtcagcaaccgacacaaagacaat
cttaacaactatgttttccaaggtcagcatcctctcacactaaatgaatcaaatccaaat
acagtggaagttgctgttacagcagaagcaaaagtaaactccagacccaggcagctttgg
aagaaatctgtggaatctttacgtcaagaatcaattcgtcagagccaaggatcacagaga
gaaaatggttcagaagaaaataggcagcattctgtaaagggccagagataccttcctgaa
gagattgtccattcggatgtatcagagacctcaagcagaaccacttgccatatggaaccc
gaaaacaataataaacaccacaaaaccaaggacaatgttaaaaaaagatcagtggtgtca
aaatacccaaaggactgtagtgatgtggagctgacatacctgaaagccaaacaaagcact
cctcgggataaaatttacacaatcgatgctgacaagcagccaggtctccacctgaaccca
cccccgtatattgaaaatattgtccttccagagactattgaattccctgctgcttaccaa
gatcacaatgacaactacaggaaagcagaacatggtaacaggactcctttgcataacgaa
gacagtcttccaaataatgaccagtacaaactttattcaaagcactatagcttaaaagat
aaaaatgcttccctagtcgaggtgaatgatagatacagacagaattccacccattgcagg
agctgtctttccaatctgcccagctacacaggccattattcaagcaggtctccctataaa
tgtgatgcttgcttgaggatggggaacttatatgatattgatgaagatcaaatattgcag
gaagcagccaactccgagcatcctgaagaaatgtatgaacatgactgggttcagaataat
gcaatccagcatcagaaaaaggataagctgaggatcagcaggcaacactcttttgacaac
atcctcgataagtgccgggacatagatattggaagacctgctcgaagcataagcttgaaa
gagaaagagaggtttctagacagcagctcatatgcaaacacatttcatttccccccaagc
aaactgttgagtaacaagagctcacttgtaacgcaaactctggaggacagtaagcggagc
aaatccctgtatcctgatcactctgcagataacccttttctgcactcctatcgtgatgac
cagcacttcgtttttgggcgaagtcctgctgatctttataaacaatcattagcagcaaaa
gcaagaaatgataattattcaaagtcatccataaagtccacagcatcatacagttcccga
gatggccgggtccataatgatatgtacctttcagagcatgttatgccttatgttgcaaat
aagaatagtgtgtactcaactccaagagttttaaattcctgcagcaatagacgtgtgtat
aagaaaatgcctagtattgaatcagacgtttaa
DBGET
integrated database retrieval system
